Granulibacter bethesdensis CGDNIH1: GbCGDNIH1_2002
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Entry
GbCGDNIH1_2002 CDS
T00392
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
gbe
Granulibacter bethesdensis CGDNIH1
Pathway
gbe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GbCGDNIH1_2002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbe03400
]
GbCGDNIH1_2002
Enzymes [BR:
gbe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GbCGDNIH1_2002
DNA repair and recombination proteins [BR:
gbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GbCGDNIH1_2002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ABI62900
UniProt:
Q0BQK2
LinkDB
All DBs
Position
complement(2244362..2245189)
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AA seq
275 aa
AA seq
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MALMRVRVATWNINSLRLRLPLLEKVLAELDPDVLCLQETKVPDPLFPADLFPGRAAEHH
GYAHVAYRGMKGYNGVAILSRIPFTVDEAAPDWCAKGDCRHMAVSLAVPSGPVALHNFYV
PAGGDEPDPAINPKFAHKLAFVEEATAYFAAQSPFTRTVLVGDLNIAPLEHDVWSHKQLL
NVVSHTPPETTRMRQWLETGFVDAIRHFVPSDRKHYTWWSYRNRDWRASDRGRRLDHVWV
SPDLVSSLQGHTTLKEARDWERTSDHVPVSVTLSL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcactcatgcgtgtgcgtgttgcgacctggaacatcaattccctgcgtctgcgtctg
cccttgctggagaaagtgctggccgagcttgatccggatgtgctgtgccttcaggaaacc
aaggtgcctgaccccttgttcccggcagatctgttccccggcagggcggcggagcatcac
ggttatgcccatgtcgcctatcgcgggatgaaaggatataacggggttgccattctttcc
cggattcctttcacggtggatgaggcggcgccggactggtgcgccaaaggcgactgccgt
catatggcggtgtcgctggcagtgccgtcaggtcccgtggcgctgcataatttctatgtc
ccggcaggcggggatgagcccgacccggctatcaacccgaaattcgcgcataagttggct
ttcgtggaggaagccacggcctatttcgcggcgcagtctccttttacccgcaccgtgctg
gtcggtgacctcaatattgctccgctggagcatgatgtctggagccacaagcagctgctg
aatgtggtcagccatacgccgccggagaccacccggatgagacaatggctggaaaccggc
ttcgttgatgcaatacgccatttcgtgccgtcggaccgcaagcattatacgtggtggtca
taccggaaccgggactggcgtgcgtctgatcgggggcggaggctggaccatgtgtgggtc
agccctgatctggtttcttcactgcaaggccatacaaccttgaaagaggcccgagattgg
gagcgtacttctgatcatgtacccgtcagcgtgactttgtcgctgtaa
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