Citrifermentans bemidjiense: Gbem_0009
Help
Entry
Gbem_0009 CDS
T00749
Name
(GenBank) sensor histidine kinase, HAMP and PAS domain-containing
KO
K07652
two-component system, OmpR family, sensor histidine kinase VicK [EC:
2.7.13.3
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Gbem_0009
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gbm01001
]
Gbem_0009
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
gbm02022
]
Gbem_0009
Enzymes [BR:
gbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Gbem_0009
Protein kinases [BR:
gbm01001
]
Histidine kinases
OmpR family
Gbem_0009
Two-component system [BR:
gbm02022
]
OmpR family
VicK-VicR (cell wall metabolism)
Gbem_0009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
sCache_3_3
PAS
PAS_10
sCache_3_2
PAS_9
PAS_4
PAS_8
PAS_7
dCache_1
Cache_3-Cache_2
HATPase_c_5
HATPase_c_2
Vps5
Sec2p
Motif
Other DBs
NCBI-ProteinID:
ACH37040
UniProt:
B5E7Q4
LinkDB
All DBs
Position
12272..14536
Genome browser
AA seq
754 aa
AA seq
DB search
MQLRFGIRTKLLLSILAILFVSYSTLLYSSMKTLNASLQTELDRNLATNLKYARSQYLDQ
AEIAKFSMMQAVVSQTVQQRLRERDSAWFSTRIKRWHDVLPFVDLVVVVDPQEKVLATLQ
GPEKNGPMELPAMVKQALASKRAILSTELLSGEFMCRAGVPGYCERPGSEALVATVAVPV
IGTDGSVLGCVVTGDILNHHPNLPGKLQEVTGNNVEVTLTQRGLRVASSLPARVRESYIL
SPKVLDVLERGEVYRGRTDMGAKSYETIIDPLLNSRGEFVGSLSVAISTETVTNSRRENL
QYILASAFLGIICSFAMAYFASRHLTGPLRQLAMSARRIEEGDLDQRVVGHQRDEVGMLA
SSFNNMAESLKERDGIINKKTGDLQELNEQLEKMVEQRTSALSMEMGRLEAVLTSLAEGV
VVTDRDNLVVLFNPAAQQLFELVPHRVVGQSVERLCEMTGFCNVLEQVSDKAQREPRCGK
KEVTVKGKRLHVNTATLQDEAGEFAGMVMSLRDVTKEEQVDRMKTEFISTVSHELKTPLT
SIKGSLQLLLTRSKWLTDTERQLLTVCFRNTQRLIRLISEILDISGIESGGMIFNFKPLC
IGELAVYAVEEIKSLAMGREITIVNTVGEHLPMVFGDSDRLIQVMTNLLSNAVKFSPEGK
VVMVTAEQEGNYVVVSVADRGRVIQWSDRDKLFKKFQQIESTERNKIGGTGLGLAICKEI
VERHHGRIFYTAAKEYGNTFSFTVPIIGETDAKG
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttcgttttggcataagaacaaaattgctcctgtccatactcgccatcctcttc
gtatcatactcaaccctgctgtactcctccatgaagaccctcaacgcgtcgctgcagacc
gagctggaccggaacctggcgaccaacctgaagtacgcacgcagccagtacctggatcaa
gctgagatcgccaagttttccatgatgcaggcggtggtttcgcagacggtgcagcagcgc
ctgcgcgagcgggacagcgcctggttctccacgcgcatcaagcgctggcacgacgtgctc
cccttcgtggacctggtggtcgtggtagatccccaggaaaaggtcctggccaccctccag
ggtcccgaaaaaaatgggccgatggagctgccggcgatggtgaaacaggccctcgccagc
aagagggccatcttgtcgaccgagctgctcagcggtgagttcatgtgccgcgcaggggtg
ccaggatactgcgagcgccccggcagcgaggccttagtcgccacggtggcggtcccggtc
atcggaacggacggcagcgtgctcggttgcgtggtgaccggggacatcctgaaccaccac
ccgaatctccccggcaagctgcaggaggtcaccgggaacaacgtggaggtgaccctgacc
cagcgcgggcttcgggtcgccagcagccttccggcgcgggtgcgggaatcgtacatcctc
tctcccaaggtgctcgacgtgctggagcgcggcgaagtgtaccgcggccggacggacatg
ggcgccaagagctacgaaaccatcatcgacccgcttttgaacagcaggggggagttcgtc
ggctcgctttcggtggcgatatcgacggaaacggtgaccaacagcaggcgggaaaatctg
cagtacatactcgcctcggctttcctgggcatcatctgctccttcgccatggcctacttc
gcctcgcgtcacctgacggggccgctgcggcagttagcgatgagcgcgcgccgtatcgag
gaaggggacctcgaccagagggtagtcggccaccagcgggacgaggtggggatgctggcc
tcttccttcaacaacatggccgaatcgctcaaggaacgggacggcatcatcaacaagaag
accggcgacctccaggagctgaacgaacagctggagaaaatggtcgagcagcggacctcc
gccctcagcatggagatggggaggctggaggcggtgttgacgagccttgccgaaggggtg
gtggtgaccgaccgcgacaacctcgtggtgctcttcaacccggcggctcagcagctcttc
gaactggttccgcatcgcgttgtcgggcagtctgtcgagcgcctgtgcgagatgaccggg
ttttgcaatgtcctggaacaggtcagcgataaggcgcaacgggagccccgctgcggtaaa
aaagaggtcaccgtgaaagggaagcggctgcacgtgaacacggccaccctccaggacgag
gcaggggagttcgccggaatggtcatgtcgctgcgcgacgtcaccaaggaggagcaggtg
gaccggatgaagaccgagttcatatccaccgtctcccacgagttgaagacgccgcttact
tcgatcaaggggtcgctgcaactgctgttgacgcgcagcaagtggctcacggataccgag
aggcagcttttgaccgtctgcttccgcaacacgcagcggctgatccggctgatcagcgag
atcctcgacatctccggcatcgaatccggcgggatgatcttcaacttcaagcccctttgc
atcggtgaacttgcggtgtacgcggtcgaggagatcaagtccttagccatgggacgggag
atcaccatcgtcaacaccgtgggcgagcatcttcccatggtattcggcgacagcgatcgc
ctgatccaggtgatgaccaacctcctctccaacgcggtgaagttttcccccgagggaaag
gtggtcatggtcaccgcggagcaggaaggaaactacgtggtggtctcggtggccgacaga
ggaagggtgatacagtggtccgaccgggacaagcttttcaagaagttccaacaaattgaa
tcaaccgaacgcaacaagatcggcgggaccgggttggggctcgccatctgcaaggagata
gtcgagcggcatcacggcaggatcttctacaccgccgccaaggaatacggcaataccttc
agcttcacggtgccgataataggggagacagatgcaaaaggataa
DBGET
integrated database retrieval system
