Citrifermentans bemidjiense: Gbem_0259
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Entry
Gbem_0259 CDS
T00749
Symbol
sucD-1
Name
(GenBank) succinyl-CoA synthetase, alpha subunit
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00020
Citrate cycle (TCA cycle)
gbm00640
Propanoate metabolism
gbm00660
C5-Branched dibasic acid metabolism
gbm01100
Metabolic pathways
gbm01110
Biosynthesis of secondary metabolites
gbm01120
Microbial metabolism in diverse environments
gbm01200
Carbon metabolism
Module
gbm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gbm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Gbem_0259 (sucD-1)
00640 Propanoate metabolism
Gbem_0259 (sucD-1)
00660 C5-Branched dibasic acid metabolism
Gbem_0259 (sucD-1)
Enzymes [BR:
gbm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
Gbem_0259 (sucD-1)
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Ortholog
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
DUF1515
Motif
Other DBs
NCBI-ProteinID:
ACH37290
UniProt:
B5E9Z2
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Position
complement(308151..309047)
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AA seq
298 aa
AA seq
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MSILINKSSRIVVQGITGRSGLFHTQQCREYGSNVVAGVTPGKGGIHIEGIPVFNTVAEA
VKYTSANVSMIFVPPPGAADAILEAAAAGLELAVCITEGIPVRDMVPVKAVLQQSKLRLV
GPNCPGVITPGECKIGIMPGHIHKPGKIGVVSRSGTLTYEAVKQLTDMGLGQSTCVGIGG
DPIIGMNFVDVLKMFNEDPGTEGVFMIGEIGGAAEEEAAVWIQTHMKKPVAAFIAGVTAP
PGKRMGHAGAIITGGKGKAADKIRTLTECGVTVATSPTKMGEAMQTAMGSKGNGKKQK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtccatattgatcaataagtcgtcgagaatcgtggtgcaggggatcaccggccgcagc
gggctctttcacacccagcagtgccgcgagtacggcagcaacgtggtagcgggggtcacc
cccggcaaaggggggattcacatcgaaggtatcccggtcttcaacacggtggccgaggcg
gtgaagtacaccagcgccaacgtctccatgatcttcgtgccgcctcccggcgccgctgac
gccatcctggaagcggctgccgccggtcttgaactggcagtttgcatcaccgaggggatt
ccggtgcgcgacatggtgccggtgaaggcggtcctgcagcaaagcaagctgcgcctggtc
ggccccaactgccccggcgtcatcacccccggggaatgcaagatcggcatcatgccgggt
cacatccacaagcccggcaagatcggcgtcgtctcccgcagcggcaccctcacctacgag
gcggtcaagcagctcaccgacatggggctcggccagtcgacctgcgtcggcatcgggggg
gatcccatcatcgggatgaacttcgtggacgtgctgaagatgttcaacgaggaccccggc
accgagggagttttcatgatcggcgagatcgggggagccgcggaggaagaggcggcggtc
tggattcagacgcacatgaagaagccggtcgcggcgtttatcgcaggcgtgaccgcgccg
ccgggaaagaggatggggcatgccggcgccatcatcaccggcggcaagggaaaagctgcg
gacaagatccgcaccctcaccgaatgcggcgtaaccgtcgcgacgagccccaccaaaatg
ggggaggcgatgcagacggcgatgggttcaaagggaaacggcaagaagcagaagtga
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