Gordonia bronchialis: Gbro_2208
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Entry
Gbro_2208 CDS
T01102
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
gbr
Gordonia bronchialis
Brite
KEGG Orthology (KO) [BR:
gbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbr03016
]
Gbro_2208
Enzymes [BR:
gbr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Gbro_2208
Transfer RNA biogenesis [BR:
gbr03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Gbro_2208
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ACY21456
UniProt:
D0LBP2
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All DBs
Position
2340129..2341715
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AA seq
528 aa
AA seq
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MSIDVSQRHAPVGSPDGTTLDGVQHGGVRRSYQVRTYGCQMNVHDSERIAGLLEDAGYVR
AAEDDAADLVVFNTCAIRENADNKLYGNLSHLAPVKSRRPGMQIAVGGCLAQKDKDTVLK
RAPWVDVVFGTHNIGSLPALLDRARHNDAAEVEILDALERFPSTLPAKRDSAYSGWVSVS
VGCNNTCTFCIVPSLRGKEVDRRPGDILAEVTALVDQGVLEVTLLGQNVNAYGMSFADPE
LPRDRGAFADLLRACGRIDGLERVRFTSPHPAEFTDDVIDAMAQTPNVCPQLHMPLQSGS
DRVLRAMRRSYRRTRFLGILDKVRAAMPHAAITTDIIVGFPGETEEDFAETLDVVEQARF
SSAFTFQYSPRPGTPAATMPDQVPPEVVSERYQRLIALQERICLSENESLVGSAVELLVV
DDDGRKSARTGRLTGRARDGRLVHFTVDDEGRTRIRPGDVVHTTVTAAAPHHLIADAGVS
AHRTTRAGDAHEQQRTPTTAPVGVGLGLPGIGAPAPEPAVGCATGCGG
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
gtgagtatcgacgtttcgcagcgccacgcaccggtcggatcgcccgatggtacgacgctc
gatggtgttcagcacgggggtgtccggcgcagctatcaggtgcgcacctacggatgtcag
atgaacgtgcacgattccgagcggatcgcgggtttgctggaggacgcgggttacgtgcgg
gccgccgaggacgacgccgccgatctggtggtgttcaacacctgcgccatccgagagaac
gccgacaacaagctctacggcaatctgtcgcatctcgcgccggtcaaatcccggcggccc
ggcatgcagatcgcggtcggcggctgcctggcgcagaaggacaaggacaccgttctcaag
cgcgcgccgtgggtcgacgtggtgttcggcacccacaacatcgggtcgctgccggcactg
ctggaccgggcccggcacaacgatgccgccgaggtggagatcctcgacgccctggaacgt
ttcccgtcgacgctgcccgccaagcgtgactcggcctactcgggctgggtgtcggtgtcg
gtcggctgcaacaacacctgcaccttctgcatcgtgccgtcactgcgcggcaaggaggtc
gatcgtcggcccggtgacatcctggccgaggtgacggcattggtcgatcagggtgtgctg
gaggtgacgctgctgggccagaacgtgaacgcctacgggatgtccttcgcggatccggaa
ttgccgcgcgatcgcggcgccttcgccgatctgttgcgggcctgcgggcggatcgacgga
ctcgaacgggtccggttcacctcgccgcatccggccgagttcaccgacgacgtcatcgac
gcgatggcgcagacccccaacgtgtgcccccagctgcacatgccgctgcagtccggttcc
gatcgggtcctgcgcgccatgcgtcgcagctaccggcggacgaggttcctcggcattctc
gacaaggtgcgcgccgcgatgccgcacgcagcgatcaccaccgacatcatcgtcggattc
ccgggggagaccgaggaggacttcgccgagaccctcgacgtagtggagcaggcccgattc
tccagcgcgttcaccttccagtactcaccgcggccgggaacgccggccgcgaccatgcct
gatcaggtcccgccggaggtcgtgtcggagcgctatcagcggctgatcgcactgcaggaa
cgaatctgcttgtccgagaacgagtcgttggtcgggtccgcggtggagctgctggtcgtc
gacgacgacggacgcaaatcggcacgcaccgggcggctgaccggacgtgcacgcgacggt
cggctcgtgcacttcaccgtcgacgacgagggccggacccggattcgtcccggtgacgtg
gtccacacgacagtcaccgcggccgcaccccaccacttgatcgccgacgccggggtgagc
gcgcaccgcaccacccgcgccggtgatgcacacgagcagcagcggaccccgaccacggcc
ccggtcggggtaggtctcggactgccgggcatcggtgcgcccgcacccgagccggccgtc
ggctgcgcgaccgggtgcggcggctga
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