Gallionella capsiferriformans: Galf_1541
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Entry
Galf_1541 CDS
T01295
Name
(GenBank) excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
gca
Gallionella capsiferriformans
Pathway
gca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Galf_1541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gca03400
]
Galf_1541
DNA repair and recombination proteins [BR:
gca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Galf_1541
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
GIY-YIG
HHH_5
HHH
HHH_2
HHH_3
UPF0758_N
Glyco_tranf_2_4
Motif
Other DBs
NCBI-ProteinID:
ADL55560
UniProt:
D9SGB3
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Position
complement(1678903..1680708)
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AA seq
601 aa
AA seq
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MATEKFDPKPILASLPLLPGVYRYYDDKGALLYVGKAVQLKKRVSSYFQKTNVSPRIRLM
VSHIARIETTVTRSEAEALLLENNLIKSLKPRYNILFRDDKSYPYIVLTGDEFPRLTYYR
GTPNKQHQYFGPYPNSYAARETIQLLQRIFRIRTCEDSVYNNRTRPCLQHQINRCTAPCV
NLISALDYQADIHRAVLLLQGKHQEVERTLRDAMDQAAENQHYEQAAVLRDQLRALHTVQ
QKQFVESTGGTTDADIIALAQSGGLVCLNLAMVRGGRHLGDKSFFPEHAEGLASDEIVVA
FIAQHYLDLAVPPILLLASDCTDKTLAQLLSEQAGHAVKISTATTGERRQWLEMAQRNAE
LALGQRVMQQGGQQQRLDRLREWLEMPTVQRIECFDISHIMGEATVASCVVYENLDMRSS
QYRRYNISGITPGDDYAAMRQALTRRYQKIRTGEGARPDLVLIDGGLGQLHVAMEVMAEL
ALDLALVGVAKGVERKPGMEQLIFPDGTARQLPADDPALHLIQQIRDEAHRFAVAGHRAR
RGKTRTASSLEEIAGVGDKRRRSLLTHFGGLREVAQASVEQLCQVEGISKSLAQVIYQRL
H
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
ttggctacggaaaaatttgatcccaagcctatcctggccagcctgccgctgctgccgggc
gtctatcgctattacgatgacaagggtgcgctgctctatgttggtaaggctgttcagctg
aaaaaacgcgtctcatcgtattttcagaagaccaatgtgtcgccgcgcatccgtttgatg
gtctcgcatattgcgcgcatcgaaaccacggtgacgcgctctgaagccgaggccttgctg
cttgaaaacaatctgatcaaatccctaaagccgcgttacaacatcctgtttcgcgatgac
aagtcctatccgtatatcgtactgacgggggatgagtttccccgtttgacctattatcgc
ggcacgccgaacaagcagcatcagtatttcggcccgtatccgaattcttatgccgcgcgc
gagacgatacagttgctgcaacggatatttcgcatccgcacctgcgaggacagcgtgtat
aacaatcgcacgcgtccctgtttgcagcatcagatcaatcgctgcaccgcgccctgtgtg
aatctgatctcggcactagactatcaggccgatatacatcgtgccgtactactgttgcag
ggtaaacatcaggaagtcgagcgcactttgcgcgatgcgatggatcaggcggctgaaaat
cagcattacgagcaggccgccgtgctgcgcgaccagttgcgtgcgctgcataccgtccag
caaaaacaattcgtagagtcgaccggcgggacgacggatgccgatatcatcgcactggcg
caatcaggcggtttggtctgcctgaatcttgcgatggtgcgtggcggacgtcatctggga
gataagagttttttccctgagcatgcggaaggtctggcctcagatgaaattgtcgtagcc
tttatcgcgcagcattatcttgatctcgccgtgccaccgatactgttgctcgcgtctgac
tgcaccgataaaaccctggcgcaactgttgagcgagcaggcgggacatgcagtgaaaatt
agcaccgctacgacaggcgagcgccggcaatggcttgagatggcgcaacgcaatgccgag
ttggcgctggggcagcgcgtgatgcagcaaggcgggcagcaacagcgtctggacaggttg
cgtgaatggctggaaatgcccactgtgcagcgcatcgagtgttttgatatcagtcatatc
atgggcgaggccacagtcgcctcctgtgtggtctacgaaaatctggatatgcgttcttcg
caataccggcgctacaacatcagtggcattacgccgggggatgactatgcggcgatgcgt
caggcattgacccgtcgctatcagaaaatccgcacgggggagggcgcacggccggatctg
gttttgatcgacggcggtctggggcagttgcatgtcgcgatggaagtcatggcggagctg
gcgcttgatctggcgctggtgggggtggcgaagggcgttgagcgtaagcctggcatggag
cagctgattttccccgacggtacggcacggcagttgccagcggatgatcccgcgctgcat
ttgatacaacagatccgtgacgaggcgcaccgttttgcggtagccggccaccgcgcacgg
cgcggcaaaacgcgcaccgcatcgagtttggaggaaatcgcgggggttggcgacaaacgc
cgccgcagcctgctgacccactttggcgggctgcgtgaagtcgcgcaggcctccgtcgag
caactctgtcaggttgaaggaatcagtaaatcgcttgcccaagtgatttaccagcggcta
cactaa
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