KEGG   Gallionella capsiferriformans: Galf_1541
Entry
Galf_1541         CDS       T01295                                 
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
gca  Gallionella capsiferriformans
Pathway
gca03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Galf_1541
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gca03400]
    Galf_1541
DNA repair and recombination proteins [BR:gca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Galf_1541
SSDB
Motif
Pfam: UvrC_RNaseH_dom UVR GIY-YIG HHH_5 HHH HHH_2 HHH_3 UPF0758_N Glyco_tranf_2_4
Other DBs
NCBI-ProteinID: ADL55560
UniProt: D9SGB3
LinkDB
Position
complement(1678903..1680708)
AA seq 601 aa
MATEKFDPKPILASLPLLPGVYRYYDDKGALLYVGKAVQLKKRVSSYFQKTNVSPRIRLM
VSHIARIETTVTRSEAEALLLENNLIKSLKPRYNILFRDDKSYPYIVLTGDEFPRLTYYR
GTPNKQHQYFGPYPNSYAARETIQLLQRIFRIRTCEDSVYNNRTRPCLQHQINRCTAPCV
NLISALDYQADIHRAVLLLQGKHQEVERTLRDAMDQAAENQHYEQAAVLRDQLRALHTVQ
QKQFVESTGGTTDADIIALAQSGGLVCLNLAMVRGGRHLGDKSFFPEHAEGLASDEIVVA
FIAQHYLDLAVPPILLLASDCTDKTLAQLLSEQAGHAVKISTATTGERRQWLEMAQRNAE
LALGQRVMQQGGQQQRLDRLREWLEMPTVQRIECFDISHIMGEATVASCVVYENLDMRSS
QYRRYNISGITPGDDYAAMRQALTRRYQKIRTGEGARPDLVLIDGGLGQLHVAMEVMAEL
ALDLALVGVAKGVERKPGMEQLIFPDGTARQLPADDPALHLIQQIRDEAHRFAVAGHRAR
RGKTRTASSLEEIAGVGDKRRRSLLTHFGGLREVAQASVEQLCQVEGISKSLAQVIYQRL
H
NT seq 1806 nt   +upstreamnt  +downstreamnt
ttggctacggaaaaatttgatcccaagcctatcctggccagcctgccgctgctgccgggc
gtctatcgctattacgatgacaagggtgcgctgctctatgttggtaaggctgttcagctg
aaaaaacgcgtctcatcgtattttcagaagaccaatgtgtcgccgcgcatccgtttgatg
gtctcgcatattgcgcgcatcgaaaccacggtgacgcgctctgaagccgaggccttgctg
cttgaaaacaatctgatcaaatccctaaagccgcgttacaacatcctgtttcgcgatgac
aagtcctatccgtatatcgtactgacgggggatgagtttccccgtttgacctattatcgc
ggcacgccgaacaagcagcatcagtatttcggcccgtatccgaattcttatgccgcgcgc
gagacgatacagttgctgcaacggatatttcgcatccgcacctgcgaggacagcgtgtat
aacaatcgcacgcgtccctgtttgcagcatcagatcaatcgctgcaccgcgccctgtgtg
aatctgatctcggcactagactatcaggccgatatacatcgtgccgtactactgttgcag
ggtaaacatcaggaagtcgagcgcactttgcgcgatgcgatggatcaggcggctgaaaat
cagcattacgagcaggccgccgtgctgcgcgaccagttgcgtgcgctgcataccgtccag
caaaaacaattcgtagagtcgaccggcgggacgacggatgccgatatcatcgcactggcg
caatcaggcggtttggtctgcctgaatcttgcgatggtgcgtggcggacgtcatctggga
gataagagttttttccctgagcatgcggaaggtctggcctcagatgaaattgtcgtagcc
tttatcgcgcagcattatcttgatctcgccgtgccaccgatactgttgctcgcgtctgac
tgcaccgataaaaccctggcgcaactgttgagcgagcaggcgggacatgcagtgaaaatt
agcaccgctacgacaggcgagcgccggcaatggcttgagatggcgcaacgcaatgccgag
ttggcgctggggcagcgcgtgatgcagcaaggcgggcagcaacagcgtctggacaggttg
cgtgaatggctggaaatgcccactgtgcagcgcatcgagtgttttgatatcagtcatatc
atgggcgaggccacagtcgcctcctgtgtggtctacgaaaatctggatatgcgttcttcg
caataccggcgctacaacatcagtggcattacgccgggggatgactatgcggcgatgcgt
caggcattgacccgtcgctatcagaaaatccgcacgggggagggcgcacggccggatctg
gttttgatcgacggcggtctggggcagttgcatgtcgcgatggaagtcatggcggagctg
gcgcttgatctggcgctggtgggggtggcgaagggcgttgagcgtaagcctggcatggag
cagctgattttccccgacggtacggcacggcagttgccagcggatgatcccgcgctgcat
ttgatacaacagatccgtgacgaggcgcaccgttttgcggtagccggccaccgcgcacgg
cgcggcaaaacgcgcaccgcatcgagtttggaggaaatcgcgggggttggcgacaaacgc
cgccgcagcctgctgacccactttggcgggctgcgtgaagtcgcgcaggcctccgtcgag
caactctgtcaggttgaaggaatcagtaaatcgcttgcccaagtgatttaccagcggcta
cactaa

DBGET integrated database retrieval system