KEGG   Gluconacetobacter diazotrophicus PAl 5 (Brazil): GDI0169Help
Entry
GDI0169           CDS       T00631                                 

Definition
(GenBank) putative DNA ligase-like protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
gdi  Gluconacetobacter diazotrophicus PAl 5 (Brazil)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:gdi00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    GDI0169
Enzymes [BR:gdi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     GDI0169
DNA repair and recombination proteins [BR:gdi03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     GDI0169
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
RhizoBase: 
UniProt: 
LinkDB All DBs
Position
177163..179733
Genome map
AA seq 856 aa AA seqDB search
MALDTYRNKRDFEATPEPEGAEAAEKPDTGAGHLFVIQKHAARRLHYDLRLEMDGVLKSW
AVTRGPSLNPGDKRLAVQVEDHPLDYGTFEGTIPKGQYGGGTVMLWDKGTWTPLHDPVRG
LAKGHLDFELRGEKLHGRWNLVRMDGHREGTHENWLLIKAADSDARSKNDADILEERPES
VKTGRAMDDIAAGAPGKDKVGKAAAQKAVTKKAAIPKDAPQADAAATGAAPCAGAKPGPL
PSFVEPELATLVRAAPTGPQWLHEVKFDGYRLLARIEAGRVVLLTRTGLDWTARFGDQIS
AALASLPVRAALIDGELVVETAGGTSDFSALQADLSAGRTDRFIFYVFDLLHLDGYDLRD
ATLEARKGALHDLVPDDAARLRFSGHFDEAGGQVLRHACRLGLEGIVSKQRDAPYRSGRG
RDWVKSKCVARQEFVIGGYVPSTANRGAVGSLVLGVQENGRLVHVGRVGTGFTAATAADL
FRRLQPLDVPDSPFAAALTARERKGVRYVRPDCVAEVEFRAWTADGHLRHAAFLGQREDK
PAADIVREVEAPDPVSSGPSSKPVKPVSPEPAPARPARTLTHPDRSYWPDAGVTKQDLAD
YYAAIWPRMAPFITDRALALLRCPNGIAGPRFFQKNLWKGAGGHLVPLQDPEGEAGTPLI
GLHDRDGLIDLVQAAALEIHPWGASVQAWSQPDMIVMDLDPGDGVPWSMVIEAAREIRAR
LERSGLASFVKTTGGKGLHVVAPLKPGADWAVVKAFTRSMAQAMVSDSPQRYVATITKSR
RQGRILVDYLRNQRGATAVAPYSPRARPGAPVAMPLAWNELGPDIGPAHFTIGTIGARLA
VADPWAEIRDAARPLR
NT seq 2571 nt NT seq  +upstreamnt  +downstreamnt
atggcgctggacacctatcgcaacaagcgcgacttcgaggcgacgcccgaacccgagggt
gccgaggcggcggaaaagccggataccggcgcgggccatctgttcgtcatccagaaacat
gcggcacgccgcctgcattacgacctgcggctggaaatggatggcgtgctgaagagctgg
gcggtgacgcgcggccccagcctgaacccgggcgacaagcgcctggccgtgcaggtcgag
gaccacccgctggattacggcacgttcgagggcacgatcccgaaggggcagtatggcggc
ggcacggtcatgctctgggacaagggcacgtggacgccgctgcacgatccggtccggggc
ctcgccaaggggcatctcgatttcgaactgcggggcgaaaagcttcacggacgctggaac
ctggtgcggatggacggacaccgcgagggaacgcatgagaactggctgctgatcaaggcc
gccgattccgatgcacggtcgaagaacgatgccgatatcctcgaagagcggccggaatcc
gtaaagaccggccgtgcgatggacgacatcgcggccggtgcgccagggaaggacaaggtc
gggaaggcggcggcccaaaaagccgtgacgaagaaagccgcgataccgaaggacgcgccg
caggcggacgcggccgcgacaggcgccgcaccctgcgcgggggcgaagcccggcccgttg
ccatccttcgtcgagcccgaactggccacgctggtgcgcgcggcccccaccggcccgcaa
tggctgcacgaggtcaagttcgacggctaccgcctgctggcgcggatcgaagccggacgg
gtcgtgctgctgacccgcacgggcctggactggaccgcccggttcggcgaccagatcagt
gccgcgctggcgtccctgccggtgcgggcagcgctgatcgacggcgaactggtggtggaa
accgcaggcgggacctcggatttttccgctctccaggccgatctcagcgccggccgcacc
gaccgcttcatcttctacgtcttcgatctgttgcatctggacggctacgacctgcgcgac
gcgacgctggaggcgcgcaagggcgcgctgcacgacctggtgccggacgatgcggcgcgg
ctgcgcttcagcggccatttcgacgaggccggggggcaggtgctgcgccatgcctgccgc
ctgggcctggagggaatcgtctccaagcagcgggacgcgccctaccggtcgggacggggc
cgggactgggtgaaatcgaaatgcgtggcgcggcaggaattcgtgatcggcggctatgtg
ccctcgaccgccaaccggggggcggtcggctcgctggtcctcggggtccaggaaaacggc
aggctggtccatgtcggccgggtcgggaccggcttcaccgccgcgacggcggcggacctg
ttccggcgcctgcaaccgcttgatgtccccgacagtcctttcgccgctgccctgacggcc
cgcgagcgaaagggggtgcgctatgtccgccccgattgcgtggcggaagtggaattccgc
gcctggaccgccgacggccatctgcgccacgcggcgttcctgggccagcgcgaggacaag
ccggcggccgacatcgtccgcgaggtcgaagcgcccgaccccgtatcctccggcccttca
tccaaaccggtcaaaccggtttccccggaacccgcgcctgcccgcccggcccgcaccctg
acccatcccgaccggtcctactggccggatgccggcgtgaccaagcaggacctggccgat
tattacgccgcgatctggccgcgaatggcgcccttcatcaccgaccgcgcgctggcgctg
ctgcgctgccccaacggcatcgcggggccgcgcttcttccagaagaatttatggaagggc
gccggcggccacctggtgccgttgcaggacccggagggcgaggccggcacgccgctgatc
ggcctgcacgaccgcgacgggctgatcgacctggtgcaggccgccgcgctggaaatccat
ccctggggcgcgtccgtccaggcgtggtcccagcccgacatgatcgtgatggacctcgat
cccggcgacggcgtgccctggtccatggtgatcgaggcggcgcgggaaatccgcgcgcgg
ctggaacggtccggcctcgcgtccttcgtcaagacgaccggcggcaaggggctgcatgtc
gtggcgccgctgaaacccggggccgactgggcggtggtcaaggccttcacccggtccatg
gcccaggcgatggtgtcggacagtccgcagcgttatgtcgccaccatcaccaaatccagg
cgccagggccgtatcctggtcgattacctgcgcaaccagcgcggcgcgacggccgtcgcg
ccctattccccccgcgcccgtcccggcgcgccggtcgcgatgccgctggcctggaacgaa
ctggggccggatatcggacccgcgcacttcaccatcgggacgatcggcgcccgattggcg
gtcgcggacccatgggcggagatccgtgacgcggcccggccgctccgttaa

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