KEGG   Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_0325
Entry
Gdia_0325         CDS       T00798                                 
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
gdj  Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gdj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Gdia_0325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gdj03400]
    Gdia_0325
DNA repair and recombination proteins [BR:gdj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Gdia_0325
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Gdia_0325
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H AAA_22 DUF87 Kinesin AAA_5 AAA_33 Microtub_bd SWI2_SNF2
Other DBs
NCBI-ProteinID: ACI50121
LinkDB
Position
complement(360161..362392)
AA seq 743 aa
MPAPASKKTRRPDPSDEIVTFQPERQPPKEKTRRLTIQSPYEPAGDQPRAIGELVAGVEG
GERDQVLLGVTGSGKTFTMAKIIEATQKPTLILAPNKTLAAQLYGEMKQFFPDNAVEYFV
SYYDYYQPEAYVPRSDTYIEKDSQINEQIDRMRHAATQALLERNDVIIVASVSCIYGIGS
VETYSRMVVRLEVGGEIDRDRLVKALVDLQYRRNDAAFQRGTFRVRGESVDVFPVQNEDR
AWRISLFGDEIDAITEFDPLTGDKTGDLQEVSIYANSHYVTPRPTLNQAVIGIKHELRQR
LNDLTEEGKLLEAERLQQRTTFDLEMIETTGVCKGIENYSRYLSGRQPGDPPPTLFEYLP
EDALLIVDESHVTVPQIGGMERGDFARKSILSEFGFRLPSCLDNRPLKFAEWDLFRPQTI
FVSATPGPWEMERVGGVFAEQVIRPTGLIDPVTDIRPVERQVDDLLAECRLTIAAGGRVL
VTTLTKRMAEDLTDYMNEAGIRVRYLHSDVDTLERIEIIRDLRLGAFDVLIGINLLREGL
DIPECSLVAILDADKEGFLRSRTSLVQTIGRAARNVDGRVVLYADKMTDSLRYAIEETAR
RREKQSAWNAAHGITPQSVRKQIGEALSSVFEQDYVTVAPTKDGDVAEFVGKDLGSAIAE
LEKRMRAAAADLEFETAARLRDEIKRLEALELGLDPVPVPVSTAGTGRPPRRKAGKGPEP
LGPGGGGYDPSKGRGPRRRGGGR
NT seq 2232 nt   +upstreamnt  +downstreamnt
atgcccgcgcccgccagcaagaagacccgccgtcccgatccgtcggacgagatcgtgacc
ttccagcccgaacggcagccgccgaaggagaagacgcggcgactgaccatccagtcgccc
tacgaaccggcgggcgaccagccgcgtgccatcggcgaactggtggcgggggtcgaaggc
ggcgagcgcgaccaggtgctgctgggcgttaccgggtcgggcaagaccttcacgatggcc
aagatcatcgaggcgacgcagaaacccaccctgatcctggcgccgaacaagacgctggcg
gcccagctctatggcgagatgaagcagttcttccccgacaacgcggtggaatatttcgtc
agctactacgattactaccagcccgaggcctatgtcccgcgctcggacacctatatcgaa
aaagacagccagatcaacgaacagatcgaccgtatgcgccacgccgcgacccaggcgctg
ctggaacgcaacgacgtcatcatcgtggcctcggtgtcgtgcatctacggtatcggctcg
gtcgaaacctattcgcgcatggtggtgcggctggaggtcgggggggagatcgaccgcgac
cggctggtcaaggcgctggtggacctgcaataccggcgcaacgacgcggccttccagcgc
ggaacctttcgcgtgcgcggtgaaagcgtggacgtgttcccggtgcagaacgaggaccgg
gcctggcggatctcgctgttcggcgacgaaatcgacgccatcaccgaattcgatccgctg
acgggcgacaagaccggcgacctgcaggaggtcagcatctacgccaacagccattatgtc
acgccgcgccccacgctgaaccaggcggtgatcggcatcaagcatgaactgcgccagcgc
ctgaacgacctgacggaagagggcaagctgctggaggccgagcggttgcagcagcgcacc
acgttcgacctggagatgatcgagaccaccggggtgtgcaagggaatcgagaattattcc
cgctacctgtccggccgccagcccggcgatccgccgccgaccctgttcgaatatttgccc
gaggacgcgctgctgatcgtcgatgaaagccacgtcaccgtgccgcagatcggcggcatg
gagcggggggatttcgcgcgcaagtccatcctgtcggaattcggcttccgcctgccgtcc
tgcctggacaaccggccgctgaaattcgcggaatgggacctgttccggccgcagacgatc
ttcgtcagcgccacccccggcccgtgggaaatggaacgcgtgggcggcgtctttgccgaa
caggtcatccgccccaccgggctgatcgacccggtgaccgatatccgcccggtggaacgg
caggtcgatgatctgctggcggaatgccgcctgaccatcgcagcaggggggagggtgctg
gtcacgaccctgaccaagcgcatggccgaggacctgaccgattacatgaacgaggccggg
attcgcgtccgctacctgcattcggacgtcgatacgctggaacggatcgaaatcatccgc
gacctgcgcctgggcgcgttcgacgttctgatcggcatcaacctgctgcgcgaggggctg
gacattcccgaatgttcgctggtcgcgatcctggacgcggacaaggagggcttcctgcgc
tcgcgcacctcgctggtccagacgatcgggcgcgcggcgcgcaacgtggacgggcgcgtc
gtgctctatgccgacaagatgaccgacagcctgcgctacgccatcgaggaaacggcgcgg
cggcgggaaaagcagtcggcctggaacgcggcgcacgggatcacgccgcaatcggtccgc
aagcagatcggcgaggccctgtcttcggtgttcgagcaggattacgtcaccgtcgcgccc
acgaaggatggggatgtcgcggaattcgtcggcaaggatttgggcagcgcgatcgccgag
ttggaaaagcggatgcgcgcggcggcggcggacctggaattcgaaaccgcggcgcggctg
cgcgacgagatcaagcggctggaggcgctggaactgggactggacccggtaccggtgccc
gtctcgacggcaggcaccgggcggccgccccggcgcaaggcgggcaagggacccgagccg
ttggggccgggcggcggcggatatgatccgtccaaggggcgtggaccgcgccgccgaggt
gggggacgatag

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