Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_2911
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Entry
Gdia_2911 CDS
T00798
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Gdia_2911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gdj03400
]
Gdia_2911
DNA repair and recombination proteins [BR:
gdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Gdia_2911
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Gdia_2911
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
RecR_ZnF
Toprim
PHF5
Motif
Other DBs
NCBI-ProteinID:
ACI52642
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Position
3189738..3190331
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AA seq
197 aa
AA seq
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MGGTDIERLIALLARLPGLGPRSARRAALALLRQPQARMLPLAQAMEQAARSVRTCSSCG
NLDTHDPCTICADPGRDRGLVCVVETVGDLWALERAGVHRGVYQVLGGTLSALAGMGPDD
LNVASLLARIEQGGVREIILALGATVDGATTAHWLQDRLAAFDVPVSRVGQGVPMGGALD
VLDDGTLAAALMARRPA
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcacggacatcgaacggctgatcgcgctgctggcgcgcctgccgggcctgggt
ccgcgttcggcccgccgtgcggcgctggcgctgctgcgccagccccaggcgcggatgctg
ccgctggcccaggcgatggagcaggcggcgcggtcggtgcgcacctgttcgtcctgcggc
aacctggatacgcatgatccctgcaccatctgcgccgatcccggccgcgatcgcggcctg
gtctgcgtggtcgagacggtgggggatctgtgggcgctggaacgcgccggcgtgcatcgc
ggcgtctatcaggtgctgggcggcacgctctcggccctggcgggcatggggccggatgat
ctgaacgtggcgtcgctgctggcgcggatcgaacagggcggggtgcgcgaaatcatcctg
gcgctgggcgccacggtcgatggcgccaccacggcgcactggctgcaggaccggctggcc
gccttcgacgtgccggtcagccgggtcgggcagggggtgccgatgggcggcgcgctggac
gtgctggacgacggcacgctggccgcagccctcatggcgagacgacctgcttaa
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