Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_3175
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Entry
Gdia_3175 CDS
T00798
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj00300
Lysine biosynthesis
gdj00550
Peptidoglycan biosynthesis
gdj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Gdia_3175
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Gdia_3175
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gdj01011
]
Gdia_3175
Enzymes [BR:
gdj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Gdia_3175
Peptidoglycan biosynthesis and degradation proteins [BR:
gdj01011
]
Precursor biosynthesis
Amino acid ligase
Gdia_3175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ACI52905
LinkDB
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Position
complement(3478174..3479637)
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AA seq
487 aa
AA seq
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MTHPLSQVLAAAGLSAPPGADPAITGVTADSRRVTPGMLFVAIPGTRADGSAFIPAAIAA
GAAAIVAPRGTPAPGVPVIGVDEPRRALALLAAFLAGAQPDHVVAVTGTNGKTSTVDFLR
QIWGHQHRRAASIGTLGVIADIDLPDCGPVLTTPDSVGLATLLAAMARGGVTDVAIEASS
HGLDQHRLDGLRLSAAGFTNLTRDHLDYHGTLDAYRAAKLRLFDTLLPPDGLMAANADMD
TATLDALRDIAARRGLDLRLVGEAGDAIRLLGSTPLPEGQHLRIASGGVARDIVLALPGR
FQADNALLAAALAAPGADGLARAIDLLPALRGVRGRMERAALLPNGAAAYVDYAHTPDAL
ARLLDALRPHASGRLIAVFGAGGDRDRGKRPLMGQEATRRADIAIVTDDNPRTEDPAFIR
GEVLAGAPGAIEIGDRARAIAEGLSMLRAGDVLVVAGKGHEQGQTIGTATLPFDDASVIR
DLAGVRA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacccaccccctgtcccaggtgctggcggcggccggcctgtccgccccgcccggcgcc
gacccggcgattaccggcgtgaccgccgacagccggcgggtgacgccgggcatgctgttc
gtcgccattcccggcacgcgcgccgacggcagcgccttcatccccgccgcgatcgccgcc
ggcgccgccgcgatcgtcgcaccgcgcgggacccccgcgcccggcgtcccggtcatcggg
gtggacgaaccgcgccgggcgctggccctgctggcggcgttcctcgccggggcgcagccg
gaccatgtcgtcgccgtcaccggcaccaacggcaagaccagcaccgtcgatttcctgcgc
cagatatggggccatcagcaccgccgcgccgccagcatcggcacgctgggggtgatcgcg
gacatcgaccttcccgattgcgggccggtcctgaccacgccggacagcgtgggcctggcc
accctgctggccgccatggcgcgcggcggcgtcaccgacgtggccatcgaggcatcgtcc
cacgggctggaccagcaccggctggacgggctgcgcctgtcggcggccggctttaccaac
ctgacccgagaccatctggactatcacggcacgctggacgcctaccgcgcggccaagctg
cgcctgttcgacacgctgctgccgccggacgggctgatggcggcgaatgcggacatggac
accgcgacgctggacgcgctacgcgatattgccgcgcggcggggactggacctgcgcctg
gtcggcgaagcgggagatgcgatccgcctgctgggcagcaccccgctgcccgagggccag
catctgcggatcgcgtcgggcggggttgcgcgcgacatcgtcctggcactgcccggccgc
ttccaggccgacaatgcgctgctggcggcggcgctggccgcgccgggcgccgacgggctg
gcccgggcgatcgacctgctgcctgcgctgcgcggcgtgcgcggacggatggagcgcgcg
gcgctgctgcccaacggggcggcggcctatgtcgattacgcccataccccggacgcgctg
gcccgcctgctggacgcgctgcgcccgcacgcctcgggccggctgatcgccgtgttcggc
gccggcggcgaccgcgatcgcggcaagcgcccgctgatggggcaggaagcgacccgccgc
gccgacatcgccatcgtcaccgacgacaacccccgcaccgaggaccccgccttcatccgg
ggcgaggtcctggccggcgcgccgggcgcgatcgaaatcggcgatcgcgcgcgggcgatc
gccgagggcctgtcgatgctgcgggccggcgacgtgctggtggtggccggcaagggccac
gaacagggccagaccatcggcaccgcgacgctgcccttcgatgacgcatcggtcattcgc
gacctggccggggtgcgggcatga
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