Geobacillus sp. 12AMOR1: GARCT_00185
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Entry
GARCT_00185 CDS
T03966
Symbol
sigW
Name
(GenBank) ECF RNA polymerase sigma factor SigW
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
gea
Geobacillus sp. 12AMOR1
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gea03021
]
GARCT_00185 (sigW)
Transcription machinery [BR:
gea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GARCT_00185 (sigW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_16
DUF1492
HTH_WhiA
UPF0122
HTH_23
Clr5
Motif
Other DBs
NCBI-ProteinID:
AKM17534
LinkDB
All DBs
Position
161912..162475
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AA seq
187 aa
AA seq
DB search
MDLFIKKRIKAIRKGDQNAYADLVDLYKDKIYRLCYRMLGNRHEAEDAAQEAFIRAYVHI
DTYNPEMKFSTWLYRIATNLTIDKLRKRKPDVYLDEELNGTDGLTMQAQLPSREASPEEA
VESLELQETVQRAIDQLPEKYRSVIVLKYIEDLSLQEISEILELPVGTVKTRLHRGREAL
RRQLGHL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggatttgttcattaaaaaacgaattaaggcgatccgaaaaggcgaccaaaatgcgtac
gctgatcttgtcgacttgtataaagataaaatttaccgcctttgttatcgaatgctcggc
aaccggcacgaggcggaagatgcggcacaagaggcgttcatccgcgcttatgtccatatt
gatacgtacaacccggaaatgaaattttccacatggctgtaccggattgcgacgaattta
acgatcgataagctgcggaaacggaagcctgatgtgtatttggatgaagaactaaacggt
acggacggattgacgatgcaggcgcagcttccttcacgcgaagcgtcccctgaagaggcg
gtcgaaagcttggaactgcaggagacggttcaacgggcgattgatcagctgccggaaaaa
taccggagcgtgatcgtgctgaagtatattgaggatctgtcgttgcaagagattagcgag
attttagagttgccagtcggcacagtgaaaacaaggctgcatcgcgggcgtgaagcgctg
cgcagacaacttggccatctataa
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