Geobacillus sp. 12AMOR1: GARCT_02066
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Entry
GARCT_02066 CDS
T03966
Symbol
kdgR_4
Name
(GenBank) HTH-type transcriptional regulator KdgR
KO
K02525
LacI family transcriptional regulator, kdg operon repressor
Organism
gea
Geobacillus sp. 12AMOR1
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gea03000
]
GARCT_02066 (kdgR_4)
Transcription factors [BR:
gea03000
]
Prokaryotic type
Helix-turn-helix
LacI family
GARCT_02066 (kdgR_4)
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
PucR
TetR_N
HTH_31
HTH_10
HTH_26
HTH_40
Fe_dep_repress
HTH_7
HTH_IclR
MarR_2
HTH_24
HTH_Tnp_ISL3
HTH_19
FtsL_2
LMSTEN
HTH_ABP1_N
Motif
Other DBs
NCBI-ProteinID:
AKM19326
LinkDB
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Position
complement(2056934..2057968)
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AA seq
344 aa
AA seq
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MKKVTMADVAKLANVSKSTVSQYLNKRYEYMSEETRKRIARAIEELGYQPNIIARSLKQK
TTATIGVIVFNILHMLTIQVLHAIEEACQERGFHVIVCNTDDDPEKEKKYIEMLRAKQVD
GLIIFPTGKNAEIYQKMVEERFPLIFVDRMVPGIKADAVLLDNKKAAALAVEYLAERGYQ
RIGVVAPPLVSHVIPRMERIEGFRQTLTEKGLPVIADYVVATEISSIQSELAKLFASGRP
PQALFAINDLTLMEILHFVKNNGIHVPDDLALISIDDVPFADIYTPTLTTIAQPTFAMGK
KAAERLFMQITKKQKHKPQIFRFPPTLIERKSVRQRGNHNDGRQ
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaagtaacgatggccgatgtcgcgaagttagccaatgtttcaaaaagcaccgta
tcgcaatatttaaataaacgctatgaatatatgagcgaggaaacgagaaaacggattgct
cgagcaattgaagagctaggatatcagccgaatattatcgctcgcagcttaaaacagaaa
acaacagcaaccatcggagtcattgtcttcaatattttgcatatgcttacgattcaagtc
ttgcatgccatcgaagaagcgtgccaagagcgcggttttcatgtcattgtttgcaatacg
gatgacgacccggaaaaagagaaaaagtatattgagatgttgcgcgcaaaacaagtcgat
ggcttgattattttcccgacaggaaaaaatgccgaaatatatcaaaaaatggtcgaagag
cgctttccgcttatatttgtcgaccggatggttccggggattaaagcggatgcggttctg
cttgacaataaaaaagcggccgctttagcagttgaatatcttgccgagcgaggctaccaa
cgcatcggggtcgttgctcccccgcttgtttcccatgtcattccaaggatggagcgcatt
gaaggatttcggcagacgctaacggaaaaagggcttccagttatcgctgattatgttgtc
gcgaccgaaatttcctccattcagagtgaactagcaaagctgtttgcttcaggccgtccg
ccacaagcgctgtttgcgattaacgatttgacattgatggagattttgcatttcgtcaag
aacaacggcatccatgtgcctgatgatttggcgctgatcagcattgatgatgttccgttt
gccgatatttatacgccaacgttaacaacgattgcccagccaacttttgcgatggggaaa
aaagctgcagagcgtttatttatgcagattaccaagaaacaaaaacacaagccgcaaatt
tttcgctttccgcctacattgatagagcggaaatctgtccgacaaagggggaaccacaat
gacggcagacaataa
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