Geobacillus sp. 12AMOR1: GARCT_02319
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Entry
GARCT_02319 CDS
T03966
Symbol
rnz
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gea
Geobacillus sp. 12AMOR1
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gea03016
]
GARCT_02319 (rnz)
Enzymes [BR:
gea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
GARCT_02319 (rnz)
Transfer RNA biogenesis [BR:
gea03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
GARCT_02319 (rnz)
Prokaryotic type
GARCT_02319 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AKM19571
LinkDB
All DBs
Position
complement(2286169..2287092)
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AA seq
307 aa
AA seq
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MELLFLGTGAGVPAKERNVSSVALQLLDERGATWLFDCGEATQHQILHTAIRPRRIEHIF
ITHLHGDHLFGLPGLLGSRSFQSGETPLTVFGPKGIRAFVETALSVSGTRLRYELNIAEI
EEGVIFDDERFQVIAKRLDHGMLSYGFRVVEKDLPGPLLVERLQALGVRPGPIYQQIKQG
KTVMLDDGTVIDGREFVGPPQKGRIVAVLGDTRFCEAAIELARDADVVVHEATFAAAEQR
LAHDYFHSTTTDAAEVARRAGAKRLILTHISSRYQGEAALRLVAEARSVFPNTELAVDFA
SFSIPRG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttggaactgttgtttttaggtacgggtgccggcgtgccggcgaaagagcgcaacgtatcg
tccgtcgctttgcagctgcttgacgagcgcggggcgacatggctgtttgactgcggcgaa
gcgacgcagcatcaaattttgcataccgccattcgcccgcgccgcatcgagcatattttc
atcacccatttgcatggcgatcatctattcggcctgcctgggctgcttggcagccgttcg
tttcaaagcggcgaaacgccgcttacggtcttcggcccgaaaggcattcgcgcgtttgtg
gagacggcgctgtccgtcagcgggacgcggctgcggtatgaattgaacatcgccgagatc
gaagaaggagtcatttttgatgatgaacggtttcaagttatcgccaaacggctcgaccac
ggcatgctatcatacggtttccgcgtcgtggaaaaagatttgcccggcccgctcttggtc
gagcgattgcaagcgctcggcgtccgccctggcccgatttatcaacaaatcaagcaaggg
aaaacagtcatgctcgatgacggcacggtcatcgacgggcgcgaatttgtcgggccgccg
caaaaggggagaatcgtcgcggtgctcggcgacacccgtttttgcgaagcggcgattgaa
ctcgcccgcgatgccgatgtcgttgtccacgaggcgacgtttgccgcggcggaacagcgg
ctggcccatgactatttccattccacgaccacagacgcagccgaggtggcgaggcgggcc
ggagcgaagcggcttattttgacccatatcagctctcgctatcaaggcgaggcggcgctg
cggctcgtcgccgaggcgcgcagcgtgtttccgaacaccgagctcgccgttgatttcgcc
tcgttttcgatcccgcgcggttaa
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