Gemmobacter aquarius: HYN69_11845
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Entry
HYN69_11845 CDS
T05407
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
geh
Gemmobacter aquarius
Brite
KEGG Orthology (KO) [BR:
geh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
geh03032
]
HYN69_11845 (topA)
03400 DNA repair and recombination proteins [BR:
geh03400
]
HYN69_11845 (topA)
Enzymes [BR:
geh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HYN69_11845 (topA)
DNA replication proteins [BR:
geh03032
]
Prokaryotic type
DNA Topoisomerases
HYN69_11845 (topA)
DNA repair and recombination proteins [BR:
geh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYN69_11845 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AWB49103
UniProt:
A0A2S0UMS4
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Position
complement(2457942..2460572)
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AA seq
876 aa
AA seq
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MAVVVVESPAKAKTINKYLGSDYVVLASYGHVRDLPAKDGSVDTDNDFRMEWEVAPESKK
HIRAITEALKTDDTLILATDPDREGEAISWHLQEALASSLKKGKTVRRVTFNAITKDAVT
KAMQEPRDVDLPLVEAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVCLRLIVERE
MEIEAFRAQEYWTVKAVLTTPRGQEFEAQLTVLGGKKLQKFDIPTGTAAELAVQAVTSRT
FKVASVEAKPATRNPYPPFMTSTLQQEASRKYGFGAKATMNAAQRLYEAGHITYMRTDGI
DMAPEAVAEARAEIKRRFGAAYVPDAPRLYKNKAKNAQEAHECIRPTDMAASAETLRLAE
ADQRKLYDLIWKRTIACQMASARLERTVVEIVSPDGEVGLRANGQVVTFDGFLAVYDESR
DEQVVEGEDDEGRLPQIMQGEGVEKRKVAPEQHSTQPPPRYTEATLVKRMEELGIGRPST
YASIITTIQDREYVKKDKNRLIPEDKGRLVTAFLTNYFRRYVEYDFTADLEAQLDDVSAG
ERDYKEVLARFWRDFSAAIAETADLRIGEVLDKIDEFLAPHLYPARADGSDPRICPTCGS
GKLHLKTARSGGAFIGCGNYPECRYTRPIGGTDEGGGAADAVLGVDENGLPISLKSGRFG
PYVQRGEPTEEAPKPPRASLPKGWAPESITLERALQLLNLPRPIGPHPETGDLVEAGIGR
FGPYVKHGATYANITDVEEVFTIGMNRAVEVLANKATRGRGTAAVAGPLRVLGEHPDGGE
VQVMPGRYGPYVKWGKVNATLPKELTPEAVTLEEALVLVVEKAGKGKPAKAKAAAKPKAA
AKPKAAAKPKAAAKPKADAKPKAAAKPKAVKAKAAE
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgtcgttgtcgagtcacccgccaaggccaagacaatcaacaaatatcttggt
tcggactatgtggttctcgcatcttacggccatgtgcgcgatctgcccgccaaggacgga
tcggtcgataccgacaatgatttccgcatggaatgggaggttgcgcccgaatcgaaaaaa
catatccgggcgatcaccgaggcgctcaagaccgatgacacgctgatccttgcgaccgac
cctgaccgcgagggcgaggcgatttcgtggcacttgcaagaggctttggccagcagtctg
aagaagggcaagacggtgcggcgtgtcacctttaacgccatcaccaaggatgcggtgacc
aaggcgatgcaggaaccgcgcgatgtggacctgcccttggtcgaggcctatctcgcccgc
cgtgcgctggattatctggtggggttcaacctgtcgccggtgctatggcgcaagttgccg
ggggcaaaatcggcgggccgcgtgcagtcggtctgcttgcggctgatcgtcgagcgcgag
atggagatcgaggcgttccgcgcgcaggaatactggacggtcaaggccgtgctgaccacg
ccgcgcgggcaggaattcgaagcacagcttaccgtgctgggcggcaagaagttgcagaaa
ttcgacattcccaccggcactgcagccgaactggcggtgcaggctgtcacttcgcgcaca
tttaaggtggcgagcgtcgaggccaagcccgccacgcgcaatccctatccgcccttcatg
acctcgaccctgcaacaagaggccagccggaaatacggctttggcgccaaggccacgatg
aacgcggcgcagcggctgtatgaggcggggcatatcacctatatgcggaccgacgggatc
gacatggcccccgaggccgtggccgaggcgcgggccgagatcaagcggcggttcggggcg
gcttacgtgcccgatgccccgcggctttacaagaacaaggccaagaacgcgcaggaagcg
catgaatgtatccgccccaccgacatggcggccagtgccgagacgttgcgtctggccgag
gctgaccagcgcaagctttacgatctgatctggaagcgcacgatcgcctgccagatggcc
tcggcccggctggagcggacggtggtcgagatcgtcagccccgatggcgaggtgggtctg
cgcgcgaacgggcaggtggtgacgttcgacggtttcctggccgtctatgacgaaagccgc
gacgagcaggtggtcgagggcgaggatgacgagggccgtctgccgcaaatcatgcagggc
gagggtgtcgagaagcgcaaggtcgcgcccgagcagcattctacccagccgccgccgcgc
tataccgaggccacgctggtcaagcggatggaggagttggggattggccggccttcgacc
tatgccagcatcatcaccacgattcaggaccgcgaatacgtcaagaaagacaagaaccgg
ctgatccccgaggataaggggcggctggttacggcctttttgaccaactatttccggcgt
tatgtggagtatgatttcaccgccgatctggaagcccagcttgacgatgtttcggcaggc
gagcgtgattacaaggaagttctggcgcggttctggcgcgatttctcggcggcgattgcc
gagacggccgatctgcggatcggcgaggtgctggacaagatcgacgagtttcttgccccc
catctttaccccgcgcgggcggacgggtcggacccgcggatttgcccgacctgcggatct
ggcaagctgcatctgaaaacggcgcggtcgggcggggctttcatcggctgcgggaattac
cccgagtgccgctatacgcggcctatcggtgggactgacgaaggcggtggcgcggcggat
gcggtgcttggggtggacgagaacggcctgcccatcagcctgaaatcggggcggttcggc
ccgtatgtgcagcgcggcgagccgacggaagaagcgcccaagccgccgcgggccagtctg
cccaaggggtgggcgccggaaagcattacgctggagcgggcgttgcaactgctaaatctg
ccgcgcccgatcgggccgcatccggaaacgggcgatctggtcgaggcggggatcgggcgg
ttcgggccttatgtgaagcacggggcgacctatgccaacatcaccgatgtcgaggaggtc
tttaccatcggcatgaaccgtgcggtcgaggtcctggcgaacaaggccacgcgcgggcgg
ggcactgcggctgtggcggggccgctgcgcgtgcttggcgagcatcctgacggtggcgag
gttcaggtgatgccggggcggtatgggccttatgtcaagtggggcaaggtgaatgccacg
ctaccaaaggagttgacgcccgaggcggtgaccttggaagaggctttggtgctggtggtc
gagaaggcaggcaagggcaagcctgccaaggcaaaggcggctgcgaaaccgaaggcggcc
gccaagccgaaggcggctgcaaaaccgaaggcggctgccaagcccaaggccgacgcaaag
cccaaggcggctgcgaagccgaaggctgttaaggccaaggcggccgagtga
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