Geobacillus sp. JS12: A0V43_03630
Help
Entry
A0V43_03630 CDS
T04412
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
gej
Geobacillus sp. JS12
Pathway
gej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0V43_03630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gej03019
]
A0V43_03630
Messenger RNA biogenesis [BR:
gej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A0V43_03630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
EAD2
Motif
Other DBs
NCBI-ProteinID:
AMQ20213
UniProt:
A0A142CZL1
LinkDB
All DBs
Position
714616..716172
Genome browser
AA seq
518 aa
AA seq
DB search
MGSIIISALLALVIGAVVGFFVRKSIAEAKIGGAKAAAEQLIEEAKREADALKKEALLEA
KDEIHKLRTEAERDIRDRRSELQKQENRLMQKEENLDRKDEALNKREALLEAKEEALNER
QQHIEQMESKVEALVKQQQAELERISGLTRDDARQLILERVEKELSHEIAMMIKEAETRA
KEEADKRAKAILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGI
DLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKARREVDEHIREV
GEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSVEVAFLAGLMAAELGEDEMLAR
RAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSVIAVLVAA
ADALSAARPGARSETLENYIRRLEKLEEIAESYEGVEKSYAIQAGREVRIMVKPDMIDDL
EAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgatcatcatctccgctttgcttgccttagtcattggtgccgttgttggcttt
tttgttcgcaaatcgattgccgaagcgaaaatcggcggggcgaaagccgctgccgaacag
ctgattgaggaggcgaaacgcgaggcggacgccttgaaaaaagaggcgcttctcgaagcg
aaagacgagattcataaactgcgtacggaggcggagcgtgatatccgcgaccggagaagc
gaactccaaaaacaagaaaaccgcctgatgcaaaaggaggaaaatctcgaccgcaaagat
gaagcgctcaacaaacgtgaggcgttgcttgaggcaaaggaagaagcgttgaacgaaaga
caacagcatattgaacaaatggaaagcaaagtggaagcgctcgtcaaacaacaacaagcc
gaacttgaacgcatttccggcctgacgcgcgacgatgcccgccagctcattttagagcgc
gttgagaaagagctgtcgcatgagattgcgatgatgatcaaagaggcggaaacgcgggcg
aaagaggaggcagacaaacgggcaaaggcgattttgtcgcttgccatccaacgttgcgcc
gccgaccatgtcgccgaaacgacggtttccgtcgtcaatttgccaaacgacgaaatgaaa
gggcggatcatcgggcgcgaagggcggaacatccgcacgctcgagacgttgaccggcatc
gatttgatcatcgacgatacgccggaagcggtcattttgtccggatttgacccgattcgc
cgcgagacggcgcgcatcgcgctcgataagcttgtgcaagatggccgcatccatccagcg
cgcattgaggaaatggtcgaaaaggcgcgccgcgaagtggatgagcatatccgcgaagtc
ggcgaacagacgacgtttgaagtcggtgttcacggcttgcatccggatttgatcaaaatt
ttagggcggctcaagttccgaacgagctacggacaaaacgtgctgaaacattcggtggaa
gtggcgtttttagccggactgatggcggccgagcttggggaggacgaaatgctggcgcgc
cgggccggcttgcttcatgacattggcaaagcgatcgaccacgaagtggaaggaagccat
gtggaaatcggcgttgagctggcgacgaagtataaagaacatccggtcgtcatcaacagc
atcgcttcccaccatggcgatacggaaccgacgtcggtcatcgctgtgctcgtcgcggcg
gccgatgcgctgtcggcggcgcggccgggagcgcgcagcgaaacgctggaaaactatatc
cgtcgtctagagaagcttgaagaaatcgccgaatcgtacgaaggcgtggaaaaatcgtac
gccattcaagctggacgtgaagtgcgcattatggtcaaaccagatatgatcgacgatttg
gaagcgcaccggctggcgcgtgacatccgcaaacgaatcgaagaagagctcgattacccg
ggccatattaaagtgacggtcatccgcgaaacgcgggcggtcgaatacgcgaaataa
DBGET
integrated database retrieval system