Geobacillus sp. LC300: IB49_10785
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Entry
IB49_10785 CDS
T04018
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
gel
Geobacillus sp. LC300
Pathway
gel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IB49_10785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gel03021
]
IB49_10785
03400 DNA repair and recombination proteins [BR:
gel03400
]
IB49_10785
Enzymes [BR:
gel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IB49_10785
Transcription machinery [BR:
gel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IB49_10785
DNA repair and recombination proteins [BR:
gel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IB49_10785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AKU26844
LinkDB
All DBs
Position
2026402..2029974
Genome browser
AA seq
1190 aa
AA seq
DB search
MTGRLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFREISPIEDFSG
NLSLEFIDYSLGEPKYTVEEAKERDVTYAAPLRVKVRLINKETGEVKEQDVFMGDFPLMT
ETGTFIINGAERVIVSQLVRSPSVYYSDKVDKNGKRGYSATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFSSDQEIIDLLGDNEYLRNTLEKDNTDSTEKALIEIYERL
RPGEPPTLENAKNLLASRFFDPKRYDLASVGRYKINKKLHIKNRLFNQRLAETIVDPETG
EVIAEAGAMIDRRTLNRLLPYLEKGVGLRTYRPAEGVADGPIEVQTVKIYAPNDPDNEKV
INIIGNGFIAEDVKHITPADIIASISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIAAIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSTYAKVNKF
GFIETPYRRVDPETGRVTDQIDYLTADEEDNYVVAQANVPLAEDGTFLEENVIARFRGEN
IVVKRDRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLLEPEAPIVGT
GMEYVSAKDSGAAVICKHRGIVERVEAKEIWVRRLIEVDGKEVKGDLDKYRLLKFVRSNQ
GTCYNQRPIVKKGDIVEQGEILADGPSMDKGELALGRNVLVAFMTWDGYNYEDAIIMSER
LVKEDVYTSIHIEEYEAESRDTKLGPEEITRDIPNVGEDALKNLDERGIVRIGAEVKDGD
LLVGKVTPKGMTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPFLPDGTPIDIMLNPL
GVPSRMNIGQVFELHLGMAAKKLGLHIASPVFDGATEEDVWNILEEAGMARDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGVPESFKVLIKELQSLGM
DVTILTSDEQEINMENFDDDDDHAPDAIMVDVKPAEPEEASEEKDAVTKE
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggccgactagttcaatacgggcgacaccgccaacgcagaagctatgcacgcatc
agcgaagtgctggaattgccgaacttgatcgaaattcaaacgtcctcctaccaatggttt
ctcgatgaagggctgcgggaaatgtttagggaaatttccccgattgaagacttttccggc
aatctctcgcttgaatttatcgactatagtttaggagaaccgaaatatacggtcgaagag
gcgaaagaacgcgacgttacatatgcggcgccgcttcgcgtcaaagttcgcttgattaat
aaagaaacgggcgaagtgaaagaacaagacgtgtttatgggcgattttccgctcatgacg
gaaaccggaacgtttattatcaatggggcggaacgcgtgattgtctcccagctcgttcgc
tcgccaagtgtgtattacagcgataaagtcgataaaaacgggaagcgcggctattcggca
accgtgattccgaaccgcggcgcatggcttgaatatgaaaccgatgcgaaagacgtcgtt
tacgttcgcatcgaccgcacccgtaaactgccggtgacggtgcttctccgtgcgcttggg
ttcagctccgatcaagaaatcatcgacctgctcggcgacaacgaatacttgcgcaatacg
cttgaaaaagataataccgacagcacggaaaaagcgttgattgaaatttacgagcgtctt
cgtccgggcgagccgccgacgcttgagaatgcgaaaaatttgctggcgtcgcgctttttt
gatccgaagcgctatgacttggcgagcgtaggccgttataaaatcaataaaaagcttcat
attaaaaaccgtttgttcaaccagcggctggcggaaacgatcgtcgatccggaaacggga
gaagtcatcgctgaagctggagcgatgatcgaccgccggacgctgaaccgcctgctgccg
tatttggaaaaaggagtcgggctgcggacgtaccgtccggctgagggagtggcggatggt
ccgattgaggtgcagaccgtgaaaatttatgcaccgaatgatccggacaacgaaaaggta
atcaacatcatcggcaacggctttattgcggaagatgtcaaacatattacgccggcggac
atcattgcatcgatcagctatttcttcaacttgctccacggcgtcggcgatacggatgac
atcgaccatttgggcaaccgccgtctccgttcggtcggcgaactgctgcaaaaccaattc
cgcatcggcttgtcgcgcatggaacgcgtcgtgcgcgagcgcatgtcgattcaagatacg
aacacgatcacgccgcagcagctgatcaacatccgcccggtgatcgcagcgattaaagag
tttttcggcagctcgcagctgtcgcagtttatggatcagacgaacccgctcgctgaactg
acgcataagcgccgcctttctgcgcttggccccggcggattgacgcgcgagcgcgccggg
tttgaagtgcgcgacgttcactattcgcactatgggcggatgtgtccgatcgagacgccg
gaagggccgaacatcgggctcatcaactcgctgtccacttacgcgaaagtgaacaagttt
ggttttattgaaacgccataccggcgcgtcgatccggaaacagggcgggtaacggaccaa
atcgattatttgacagccgatgaagaggacaattacgttgtagcgcaggcgaacgtgccg
cttgcggaagacgggacgttccttgaggaaaacgtcatcgcccgtttccgaggcgagaac
atcgtcgtaaagcgcgaccgcgtcgactacatggacgtttcgccgaagcaagtcgtctcg
gcggcgacggcgtgcatcccgtttttggaaaatgacgactcgaaccgcgcgctgatggga
gcgaacatgcagcggcaagccgtgccgctattggagccggaagcaccgatcgtcggcaca
ggcatggagtatgtttcggcgaaagactcgggcgcggcggtgatttgcaagcatcgcggc
atcgtcgaacgcgtcgaagcaaaggaaatttgggtgcgtcggctgattgaagtggacggc
aaagaagtcaagggtgatctagataaatatcggttgctgaaattcgtccggtcgaaccaa
ggcacgtgctacaaccagcggccgatcgtgaaaaaaggcgatatcgtggagcagggcgaa
attttggccgatggcccgtcgatggataaaggcgaattggcgcttggccgcaacgtgctt
gttgcctttatgacatgggacggctacaactacgaagatgcgatcatcatgagcgaacgg
ctcgtcaaagaagacgtgtatacgtcaatccatattgaagagtatgaagccgaatcgcgc
gacacgaagctcggtccggaagaaattacacgcgacatcccgaacgtcggtgaagatgcg
ttgaaaaacttggatgagcgcggcatcgtccgcatcggcgcagaagtgaaagacggcgat
ttgctcgtcggcaaagtgacaccgaaaggaatgaccgagctgacggctgaggagcggctg
ttgcatgcgatcttcggcgaaaaagcgcgcgaggtgcgcgatacgtcgctgcgcgtcccg
cacggcggcggcggcattgtccttgacgtcaaagtgttcaaccgcgaagacggcgacgaa
ctcccgccgggcgtgaaccagttggtgcgcgtctatatcgtgcaaaagcggaaaatttcc
gaaggcgataaaatggcaggccgccacggaaacaaaggggttatctcccgcattcttccg
gaagaagatatgccgttcttgccggatggcacgccgattgacatcatgttgaacccgctc
ggcgttccgtcgcggatgaacatcgggcaagtgtttgagctgcatcttggcatggcggcg
aaaaaacttggcttgcatatcgcttccccagtctttgacggagcgacggaggaagatgtt
tggaacattcttgaagaagctggcatggcgcgcgatgccaaaacggtgctgtatgacggg
cggacgggcgaaccgtttgacaaccgcgtgtcggtcgggatcatgtacatgatcaagctt
gcccacatggtcgacgacaaactccacgctcgctcgaccggcccgtactcgcttgtcacc
cagcagccgctcggcggtaaggcgcagttcggcggccagcgctttggcgagatggaagta
tgggcgcttgaagcgtacggtgcggcgtatacgctgcaggaaattttgaccgtcaagtct
gacgatgtggttggccgcgtcaaaacgtacgaagcgatcgtcaaaggggaaaacattccg
gaaccgggtgtgccggagtcgtttaaagtgttgatcaaagagctgcaaagtctagggatg
gacgtcacgattttgacgagcgacgaacaggaaatcaacatggaaaactttgacgacgat
gatgatcatgcgccggatgcgatcatggtcgatgtgaaaccggctgaaccggaagaagcc
agcgaagaaaaagatgcggtaacgaaagagtaa
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integrated database retrieval system
