KEGG   Geospiza fortis (medium ground-finch): 102034543
Entry
102034543         CDS       T03755                                 
Symbol
BRCA1
Name
(RefSeq) BRCA1, DNA repair associated
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03440  Homologous recombination
gfr03460  Fanconi anemia pathway
gfr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102034543 (BRCA1)
  09124 Replication and repair
   03440 Homologous recombination
    102034543 (BRCA1)
   03460 Fanconi anemia pathway
    102034543 (BRCA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gfr01009]
    102034543 (BRCA1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gfr04121]
    102034543 (BRCA1)
   03036 Chromosome and associated proteins [BR:gfr03036]
    102034543 (BRCA1)
   03400 DNA repair and recombination proteins [BR:gfr03400]
    102034543 (BRCA1)
Enzymes [BR:gfr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102034543 (BRCA1)
Protein phosphatases and associated proteins [BR:gfr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102034543 (BRCA1)
Ubiquitin system [BR:gfr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102034543 (BRCA1)
  Multi subunit Ring-finger type E3
   BRCC complex
    102034543 (BRCA1)
Chromosome and associated proteins [BR:gfr03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     102034543 (BRCA1)
DNA repair and recombination proteins [BR:gfr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     102034543 (BRCA1)
    BRCA1-A complex
     102034543 (BRCA1)
    BRCA1-B complex
     102034543 (BRCA1)
    BRCA1-C complex
     102034543 (BRCA1)
    BRCA complex
     102034543 (BRCA1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     102034543 (BRCA1)
SSDB
Motif
Pfam: BRCT_assoc BRCT zf-C3HC4 zf-C3HC4_4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 BRCT_2 zf-Nse zf-C3HC4_3 zf-RING_6 zf-RING_5 zf-RING_10 zf-ANAPC11
Other DBs
NCBI-GeneID: 102034543
NCBI-ProteinID: XP_005429630
UniProt: A0A6I9HU72
LinkDB
Position
Un
AA seq 1794 aa
MDFSVITIGQVQNVLSAMQKNLECPICLDVVQEPVSTKCDHIFCRFCMFKLINKKKKGVV
ECPLCKTEVTKRSLKENSRFKQLIEGLLETIHAFELDTGVKFLKSHHFPKTSTEATAAES
LCKESSVIQSKGFRNRRKSAKGNGQENFTLQQASVNIQLTDAKMCHPRNKPQKSGSQKGT
YIEFGSESSEEFFKQTTKTGFEDKGAVQISSQGRLEELESAEKGNENSCNAQPDKLYAKE
ITLPDITGEGDFSKECLSKKSSQSITECAKPDQGNVTGCQSSPLDVLAVELLPEQCDRTG
DASPTLNGDTSFFRNTEEMGEQQSQHNSEHQESDLEDSLENRLDKSREMDTDGQSVEAAE
GYEPENDSSQDKELPLEELPQAETLHSATLNKVSKKRLKQSIQKVNEWFSKSNEILSSNS
SVDESAASADVSGEGDLCLSDKESCISGRTDPMADSMGIAAVEGKKRWSKQTAEDIKDKI
FGKTYKRGRKSNPPSTLRDILPTRQKEDVAAAECLKDFSKDRLKRKRKTACVLQPEDFIK
KKDTEKADGGPQSVNGGLGDAEKKSCDESVAVNESHLSQNRANNTLTEPEEGGESTWKKA
TEKVPTKRCDGEPEMYNCDQKSTKRRSSSAKRCRHSSRTMCALQLVVDRGSVFPDPAEPQ
IDSYPSSGEPRKADPEQNPVRRSRRLQLLSEEMTKETRKRVKGARNNSDHGRSVSGDQRN
VAAHSAECKDLCEPQDELSYRPVTNLEGGNLEANEAQVNLKNLSDAAETGKSLFSPSCLP
SNCGSTVPDTGSQDSRILGSPLLLQLPSVSAGQTASPQTEGVTESPAAAPTECRHDSQNV
PGDFKAEKLPVAKNVLELTKEAEDSDLDTQYLRNIFRHSKRSSFSLFQTRAVADPPSETF
NLSCAAQVENKASKQLQPESLQEEKTAAQNLSRVSEKDEEKEKLKTCESARVDPVPCFAV
STGEHRDGISQAAEEGILTPARAGTAQTEHKNGLLQEEQGNEKPVSNEIGIESELRQNPI
ESDGSQSDQSNTEEHDSRQNYLNTGQENSFSSESNQAGKTEVVDCTEPVLHFQSTSMICS
ATCQQSTAELSCEVTRTKSRTRERKGVKGNEEEAAQTVSTAAEALEEPLGENCGLTGLSG
TPKALLCSDTDIEENTSLCETDRKEQSAVFVKSDSAELQSRNANSKPRPRGPRKSRRRVQ
KLPSSDEESCEDEELPCFRTLIFSKSASTPLQTDKQMAPVVESPVAECPGSPTVSNDGNV
VQKVPEASLSHACASPSQESECSVNLFSSQSNMSEESLNGAQELNKHLPQAQVSKQMSSV
NDSKETSQNSSGGLKETKDESQEDPDMGANLGEASGSDSEISIVEDSCGAFSQGEILTTQ
QKNAMQNSLKKLQQEMAALEAVLKQNGSQNCEVLPVQRELPHSSTEGASEMDQTREAKNR
SPELLLSASKSSLRKRSDLEKGPGCDNVLQNKTPSEKTKPVQEHRQCQLEAENAEEQKSG
TRQNSASVSSDLFGDVTQSPDNSSSSLRLFTPQSGEATAGPVVAQNTDKSSGPGHKFKKS
ECFPEPVLHNATGKENTTNPVGTKRKEMSIVVSGLNHSEHLVVQKFVKKTQSTLSNHITE
GTTHVIMKTDEELVCERTLKYFLGIAGGKWVVGYQWIIQSFKAGRILDEENFEVRGDVIN
GRNHQGPKRARQALTEKIFKDFEICCCGPFTDMTTEHLEWMGELCGASVVKQPDLFTPTA
NSTAVVVVQPDAWKENMDYGAIQQQSNVALVTREWVLDSVACYQCQELSAYLMS
NT seq 5385 nt   +upstreamnt  +downstreamnt
atggacttctcagtgattactattggacaagtacaaaatgtgctttcagctatgcagaag
aacttggagtgcccaatatgcctggatgtggtgcaagagcctgtctcaacaaaatgtgat
cacatattctgcagattctgcatgttcaaacttatcaacaaaaagaaaaaaggtgtggtg
gagtgtcctctgtgtaagactgaagttaccaagagaagtctgaaagaaaattccagattt
aagcaactcattgaaggactgttggaaactatccatgcttttgagcttgacactggagtg
aagtttttaaagagtcatcactttcctaaaacatccacggaagccactgctgctgagtcc
ctgtgtaaagaaagttctgtcatccaaagtaagggcttcagaaacaggaggaaaagtgct
aaaggaaatggacaagaaaacttcaccttgcagcaagctagtgtgaatattcagcttaca
gatgccaaaatgtgtcacccaagaaacaaaccccagaaatctggttctcaaaagggtact
tatatagagtttggctctgaatcatctgaagagttttttaaacagacaaccaaaactggg
tttgaagacaaaggagcagttcagatttcttctcaaggaaggctggaagaacttgagagt
gctgagaaagggaatgaaaattcttgtaatgcacagcctgacaagctgtatgccaaagaa
ataacactgccagatatcacaggtgaaggtgatttctcaaaggaatgtttgagcaagaaa
agctctcagagcatcactgaatgtgccaaacctgaccaagggaatgtgactggatgccag
agctctcctttggatgttcttgctgtagagctgctcccagagcagtgtgacagaacaggg
gatgccagtcccaccctgaatggggacacatcattctttaggaacacagaagaaatgggg
gagcagcaaagccagcacaacagtgaacaccaagagtctgatttagaagatagcttggag
aacaggctggataaaagcagggaaatggatactgatggacaaagtgtggaagctgcagag
ggatatgaacctgagaatgactcttcccaggacaaagaacttcctctggaggagctacct
caggcagagacccttcactctgccaccctgaataaagtctccaagaagagactgaagcag
agcattcagaaagtcaacgaatggttttcaaaaagcaatgagattttgtcttccaattct
tcagtggatgaatctgctgcatcagctgatgtttcaggtgaaggagatctgtgtttatca
gataaagagtcctgtatttcaggaaggactgaccctatggcagattccatgggaattgca
gcagtggaaggaaaaaagaggtggtcaaaacaaacagcagaagacattaaagacaaaata
tttggcaaaacatacaagagagggaggaaatcaaatcccccttctaccttgagagacatt
ttgcctactaggcaaaaggaagatgtggctgctgctgagtgcctgaaggatttcagcaaa
gacagactcaaacggaagaggaagactgcgtgtgtcctgcaacctgaggatttcatcaag
aaaaaagatacagaaaaggcagatgggggccctcaaagtgttaatgggggccttggagat
gctgaaaagaaaagctgtgatgaaagtgttgctgttaatgagagtcacctctctcagaat
agagcaaataatacattaacagagcctgaggagggaggagagtccacatggaagaaagct
actgagaaggtccctaccaagcgctgtgatggggaaccagaaatgtataactgtgatcag
aaaagcaccaagaggagaagttcttcagcaaaaagatgcaggcattctagtagaaccatg
tgtgctctgcagttagtggtggacagaggctctgttttccctgatccagctgagccacag
attgacagctacccaagcagtggagagcccaggaaagctgatcctgagcaaaacccagtc
agacgcagcagaaggcttcagttactctctgaagaaatgacaaaagaaacaagaaaaaga
gtaaagggagccagaaataacagtgatcatggaaggtctgtctctggagaccaaaggaat
gtggcagctcactctgctgagtgcaaagacctgtgtgagcctcaagatgagttgagttac
aggccagtcactaatttggagggaggtaatctggaagcaaatgaagcgcaggtgaatcta
aagaatttatctgacgctgcagaaactggaaaaagtctgttcagtccttcatgtctgcct
tcaaactgtggttccactgtgcctgatacaggttctcaagacagcagaatacttggtagc
cccctcctcctgcagcttccttcagtgtctgctgggcaaactgcttctccccagactgag
ggggtgactgaatcacctgctgctgctcccacagaatgtaggcatgattcacaaaatgtt
ccaggggatttcaaagctgagaagttgccagtggctaaaaatgttttggaattgactaag
gaagctgaagacagtgacttggacacacaatatctgaggaatatattcaggcattccaag
cgctcctccttcagcctttttcagactcgtgctgtggcagatcctccttctgaaaccttc
aatctatcatgtgctgctcaggtagaaaataaggctagcaaacaattacaaccagaaagc
ttgcaagaggagaaaacagctgctcaaaacttgagcagggtttctgagaaagatgaagag
aaagagaagcttaagacctgtgagtctgcacgtgttgatcctgtgccttgctttgctgtc
agcacaggagagcacagggatggcatttcacaggctgcagaggaagggattctgacacca
gcaagagcagggactgctcagactgagcacaaaaatggattgctacaagaagagcagggc
aatgaaaagccagtgtcaaatgagatagggatagaaagtgagttgagacagaatcccatt
gaaagtgatggaagccagagtgatcagagtaacacagaggagcatgattccagacaaaat
tatttaaacacaggccaggaaaacagcttcagttcagaaagcaatcaggcaggaaagact
gaagttgttgattgcacagaaccagttctacattttcaatccacatcaatgatttgttct
gcaacttgtcagcaaagcactgctgaactcagctgtgaagtcactaggacaaagagtaga
acaagagaaagaaaaggtgtaaaggggaatgaagaagaagcagcccaaactgttagcaca
gctgcagaggctctggaagaacctcttggagagaattgtggccttacaggtttgtctgga
acccccaaggccttactgtgctctgatactgacattgaggagaacaccagcttatgtgag
actgataggaaagagcaatctgcagtgtttgtaaaaagtgacagtgcagaactgcagagc
agaaatgcaaattctaaaccaagacctcgaggtcctcgaaagtctcgaaggcgagtgcag
aaactgccatcttcagatgaagagtcctgtgaggatgaggagttaccctgctttaggaca
ctcatcttcagcaaatcagcaagcacacctttgcagactgataaacaaatggcacctgtg
gtggagtctccagtggcagagtgtccagggagtcccactgtgagtaatgatggcaatgtt
gtgcagaaagtgccagaagcttccctaagtcatgcctgtgcttcaccaagccaggagtca
gaatgctctgtcaacttattttcttcccagtccaacatgtctgaggaatcacttaatgga
gcacaagagctgaacaaacatttaccacaagctcaggtgtccaaacaaatgagcagtgta
aatgacagtaaagaaacttctcagaattctagtggagggctgaaggaaaccaaagatgaa
agccaagaagacccagacatgggagcaaacctaggtgaagcatctggatctgacagtgaa
ataagtattgtagaagattcctgtggagcattctctcagggtgaaatcctcaccacccag
caaaagaatgctatgcaaaatagcctgaaaaaacttcagcaagaaatggctgcacttgaa
gcagtgctaaagcagaatgggagccagaactgtgaagttttacctgtccagagggaactg
ccacattccagtactgaaggagcatctgaaatggatcaaacaagagaagcaaaaaacagg
tccccagaattgctgctttcagcttctaaatcctctttaaggaagagatcagatctggag
aaaggccctgggtgtgacaatgttctacagaacaaaactccctctgaaaagacaaaacca
gtgcaggaacacaggcagtgtcagcttgaagcagaaaatgcagaggagcagaaatctggg
accagacaaaacagtgcatctgtgtcatcagatctttttggagatgtgacccagagtcca
gataattcttcctcctctctaagactttttacccctcaaagtggagaagccacagctggg
cctgttgtggctcagaacactgataaaagctctggcccaggacacaaatttaaaaaaagt
gaatgttttcctgaacctgttctgcacaatgcaactgggaaagaaaatactacaaatcca
gtggggaccaagaggaaagaaatgtcaattgtggtctcaggtctgaatcacagtgagcat
ttggttgtccagaagtttgtgaaaaaaactcagagcactttatctaatcacattactgaa
ggaacaacccatgtcataatgaaaacagatgaggagctggtgtgtgaacggaccctgaag
tatttcctgggcattgcaggaggaaaatgggtggttggttatcagtggataattcagtct
tttaaagcaggaaggatactggatgaggagaactttgaagtcagaggagatgtaatcaat
gggagaaaccatcaaggtcccaagagggccagacaggccctgacagaaaagatctttaaa
gattttgagatctgttgctgtggacccttcactgacatgactacagagcacctggagtgg
atgggggagctctgtggtgcctctgtggtgaagcagcctgacctgttcacacccacagca
aattctacagcagttgtggttgtgcagccagatgcttggaaggaaaacatggattatgga
gcaatccagcagcagagcaacgttgccctggtaactcgggagtgggtcctggacagcgtg
gcttgctaccagtgccaggagctcagtgcttacctcatgtcctga

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