KEGG   Geospiza fortis (medium ground-finch): 102037013Help
Entry
102037013         CDS       T03755                                 

Gene name
HDAC4
Definition
(RefSeq) histone deacetylase 4
  KO
K11406  
histone deacetylase 4/5 [EC:3.5.1.98]
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:gfr00001]
 Environmental Information Processing
  Signal transduction
   04371 Apelin signaling pathway
    102037013 (HDAC4)
Enzymes [BR:gfr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     102037013 (HDAC4)
Chromosome [BR:gfr03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     102037013 (HDAC4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Un
AA seq 1083 aa AA seqDB search
MAKNSSATQSVDVILFSFSLLFPDGLSGRDQPVELLNPPRVNHMPSSVDVSTALPLQVAP
TSVPMDLRLDHQFSMPVTEPTLREHTPVPPSPRPFQEELEKPSDTRCLPLSGFWDDRIIH
LRKLQLGTQQQEMLAMKHQQELLEQQRKLEQHRQEQELEKQHREQKLQQLKNKEKGKESA
VASTEVKMKLQEFVLNKKKALAHRNLNHCISSDPRFWYGKTQHSSLDQSSPPQSGVSGTY
NHPVLGMYDSKDDFPLRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPL
DVADSACNSAPGSGPSSPNNSSNNISTENGIAGSVTSIQAETSLAHRLVNREGSVTQLPL
YTSPSLPNITLGLPATGPSSAGQAQQDAERLAIPALQQRISLFPGTHLTPYLSTTTLERD
GGTAHNPLLQHMVLLEQPTAQTPLVTDWYLSGLPLHAQPLVGGDRVSPSIHKLRQHRPLG
RTQSAPLPQNAQALQQLVIQQQHQQFLEKHKQQFQQQQLHINKVGTELSLPFCLHSSLEC
VISGSLVQPPALASLVQVKQEPIESDEEEAEPQQELEAGQRQAEQELLFRQQALLLEQQR
IHQLRNYQASLEAAGMPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFTTGLVYDTL
MLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTL
LYGTNPLNRQKLDSKKLLGSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVIEL
VFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDV
HHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPP
MGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLM
GLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVFQQRANANAVHSMEKVI
EIHSKYWHSLQRFASTVGYSLVEAQKCENEEAETVTAMASLSVGVKPAEKRPEDEPMEEE
PPL
NT seq 3252 nt NT seq  +upstreamnt  +downstreamnt
atggctaaaaatagctcagctacccaaagtgttgatgtgattttattttctttttccctc
ctctttccagatgggctttctggcagagaccagccagtggagctgttgaatccacctcga
gtgaaccacatgcccagctctgttgacgtgagcacagccctgcccttgcaagtggcgccc
acctcggtgcccatggacctgcggctggaccaccagttctccatgccagtgacggagccc
acgctgcgggagcacacgcccgtccctcccagcccgcgtccctttcaagaggaacttgaa
aagcccagcgataccaggtgtctgcctctgtctggattctgggatgacaggattattcat
cttaggaagctgcagctgggtacacagcagcaggagatgctggccatgaagcatcagcag
gagctgctggagcagcagaggaagttggagcagcaccggcaggagcaggagctggagaag
cagcaccgagagcagaaactgcagcagctgaaaaacaaagagaaggggaaagagagtgca
gtggcaagcacagaagtgaagatgaagttgcaggaatttgtgttgaacaagaagaaggct
ctggcccaccggaatctcaaccactgcatatccagcgaccctcgcttctggtacgggaag
acccagcacagctctctggaccagagctccccaccccaaagcggcgtctccggcacctac
aaccacccagtcctggggatgtacgattccaaagacgacttcccactcagaaaaacagcc
tctgagcccaacctgaagctgcgctccaggctaaagcagaaggtggcagagaggaggagc
agccccctcctgcgcaggaaggacgggcccgtggtgacggcgctcaagaagcgcccgctg
gacgtcgcagactctgcatgcaacagcgctcctggatctggtcccagctctccaaacaac
agctccaacaacatcagcactgagaatggaattgcaggatcagtcaccagtatccaggca
gagaccagcctggctcacaggctcgtcaaccgcgagggctccgtgacgcagctcccgctc
tacacctcgccctccctgcccaacatcaccctgggactgcctgccaccgggccctccagc
gcgggccaagcgcagcaggacgcagagaggctcgcaatcccagccttacagcagcggatc
tccttattccctggcactcacctcactccctacctgagcactacaacgttggagagggat
gggggaactgcacacaaccctctcctgcagcacatggtcctactggaacagccaactgca
caaacgcccctggtcacagactggtatctttcaggactgcccctgcacgcacagcccctg
gtgggtggagacagggtctccccttcgatccacaagctgcggcagcaccgcccgctgggg
cgcacccagtctgctcccctgccccagaacgcccaggccctccagcagctggtcatccag
cagcagcaccagcagttcctggagaaacacaaacagcagttccagcagcagcagctgcac
atcaacaaggtgggcaccgagctttcattgcctttttgcctccacagcagcctcgagtgt
gtgatttcggggtctctggtgcagcccccagcgctggccagcctggtgcaggtcaaacag
gagcccatcgagagcgacgaggaggaggcagagccccagcaggagctggaggccggccag
aggcaggcggagcaggagctgctcttccgccagcaagccctgctcctggagcagcagcgg
attcaccagctgaggaactaccaggcgtcgctggaggcggccggcatgcccgtgtccttc
gggggacaccggcccctgtcccgggcacagtcctcccctgcctcagccaccttccccatg
tccgtgcaggagcctcccactaagccaaggttcacaacaggccttgtgtacgacaccttg
atgctgaagcaccagtgcacctgtggaaacaccaacagccaccctgagcacgcaggcagg
atccagagcatctggtccaggctccaggagacggggctgaggggcaagtgtgagtgcatc
cgtggcaggaaggcgacgctggaggagctgcagacggttcactcggaggcgcacacgctg
ctctacggcacaaaccctctcaacaggcagaaactggacagcaagaagctcctaggttcc
ctcacgtcgatgtttgtcaggctgccttgcggtggtgtcggggtcgacagtgacaccatt
tggaacgaggtgcactcgtcgggcgccgctcgcctggccgtgggctgtgtcatcgagctg
gtgttcaaagtggccacaggagagctgaagaatgggtttgctgttgtccggcccccgggt
caccacgcagaggagagcacacccatgggtttctgctattttaactccgtggcaatcgca
gccaagctgctccagcaaaggctcaacgtgagcaaaatcctcatcgtggactgggatgtc
caccatgggaatggtactcagcaggccttctacaacgaccccaacgtcctctatatctca
ctccatcgctacgacgacggcaacttcttcccaggcagcggcgctccagatgaggttggc
acaggagctggagttggtttcaatgttaacatggcatttactggtggcctggatccgccc
atgggagacacggaatatttaactgccttcaggacagtagtgatgcccattgccaacgag
tttgccccagatgttgtgctggtctcctctggtttcgatgctgtggaagggcaccccaca
cccctgggaggatataacctgtcagcaaaatgcttcgggtacctgacgaagcagctgatg
gggctggctgggggccgcgtggtgctggccctcgagggcggccacgacctcacggccatc
tgcgacgcctcggaggcctgcgtgtctgccctgctgggaaacgagcttgaccctcttcca
gagaaggttttccagcagagagcaaacgctaacgccgtgcattccatggagaaagtcatc
gagatccacagcaagtactggcattccctccagcgttttgcctccacggtgggatattcc
ctggtggaggcccagaagtgtgagaacgaggaggcggagacggtgacggccatggcatcg
ctgtcggtgggtgtgaagccggcggagaagagacctgaggacgaacccatggaagaggag
cctcccctgtag

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