Gallus gallus (chicken): 423377
Help
Entry
423377 CDS
T01006
Symbol
VIPAS39
Name
(RefSeq) spermatogenesis-defective protein 39 homolog isoform X1
KO
K23287
VPS33B-interacting protein in polarity and apical restriction
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gga04131
]
423377 (VIPAS39)
Membrane trafficking [BR:
gga04131
]
Endosome - Lysosome transport
Others
Others
423377 (VIPAS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_C
DUF3105
Motif
Other DBs
NCBI-GeneID:
423377
NCBI-ProteinID:
XP_015143207
CGNC:
7958
Ensembl:
ENSGALG00000010459
UniProt:
A0A1D5NXV6
LinkDB
All DBs
Position
5:complement(39429292..39441234)
Genome browser
AA seq
491 aa
AA seq
DB search
MSRARADEEEYWHSSKFRAFTFDDEDDELSQLKESKRAVNSLRDIVDDDDDDLEKVSWSG
EPVGSISWSIKETASSSSSSLEGRDTSLQKGSSSYAALPKQVSSYSLSSLFKGRNRLPSL
PSLSDAFSDTGVKNYAPELRRPRAEYKDYSNDWSPRDTVRRMQRGKVCSLERFRSLQDKM
VLLDEAVAGHDGNVITAVLIFLKRTLRREVLFRELEVRQVALCHLIHFLKETGEQKLLLD
LLRFLDRTEEVALSQYREHLNIQDVEKKREFLKGCIGLPFSAEDISHIQDHYTLLERQII
IETNDRHLAMAGQSEIFRKYPRKASILNMPLVTTLFYSCFYHYTEAEGTFSSPTNLKKTF
KIPDKQYVLTALAARAKLRAWEDVDALLTTKNWLGYTKKKAPIGFHRVVEILQRNNAPVQ
VLQEYVRLVEDVETRLNLATKYKCHDVVIDTYRDLKDRIQLMAYKCKVERGSAEEEKINS
LLSNMQIRWKN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggcgcgggcggacgaggaggagtactggcacagctccaagttccgggccttc
accttcgacgacgaggatgacgagctgtcccagctgaaggaatcgaagcgggcggtgaac
agccttcgggacatcgttgacgatgacgatgacgatctggagaaggtcagctggagcggg
gagcccgtgggaagcatctcctggtcaatcaaagagacagcctccagcagcagtagctcc
ctggagggccgagacaccagcctacagaagggctcttcctcttatgctgctcttcccaag
caggtttcctcctactccctgagcagcctgttcaaaggacgaaacagacttccaagtttg
ccatccctttcagatgccttctcagacacaggagttaaaaactatgccccagaactgcgc
agaccaagagctgaatacaaggattacagcaatgactggagccccagagatacagtccgg
cgaatgcagaggggcaaggtctgttctctagagaggtttcgctccctgcaggacaagatg
gtgctcttggatgaagctgtggcgggacatgatggaaatgtcattacagctgtcctgata
ttcctgaaacggacgctaaggagagaggtcttgtttcgagagctggaggtgcggcaggtg
gccttgtgtcatctcatccatttcctcaaagaaacgggtgagcagaagctgcttctggat
ctgctcaggttcctagacaggactgaggaagttgctctctcgcagtaccgggagcatttg
aacatccaggatgtagaaaagaagagggaatttctgaaaggctgcattgggctgccattt
tcagctgaggatatctctcacatccaagaccactataccctgctggagagacagataatc
attgagaccaatgatcgacacttggcaatggctgggcagtctgagatatttcggaaatac
cctcgcaaggcctcaattctcaacatgccactagtgaccactctcttctattcctgtttt
taccactacacagaggctgagggaacgttcagcagcccaaccaatctgaagaagacattt
aagattcctgataagcagtatgtactgactgccctggctgcccgtgccaagctacgagcc
tgggaggatgtggatgcactcttaaccaccaagaactggctgggctataccaagaagaag
gcacctattggcttccaccgggtggtagagatcttgcagaggaacaatgcacctgtccag
gtgctgcaggaatatgtgcgcttagtagaggatgtggaaacacggttgaaccttgccacc
aaatacaagtgccacgatgttgtgattgatacatacagggatctaaaggatcgcatccag
ctgatggcatataaatgcaaggtggagcggggctctgcagaagaagagaagataaacagc
ctactcagtaacatgcaaatccggtggaagaactga
DBGET
integrated database retrieval system
