Gallus gallus (chicken): 427318
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Entry
427318 CDS
T01006
Symbol
MSH3
Name
(RefSeq) DNA mismatch repair protein Msh3 isoform X1
KO
K08736
DNA mismatch repair protein MSH3
Organism
gga
Gallus gallus (chicken)
Pathway
gga03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
427318 (MSH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gga03400
]
427318 (MSH3)
DNA repair and recombination proteins [BR:
gga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
427318 (MSH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_22
Motif
Other DBs
NCBI-GeneID:
427318
NCBI-ProteinID:
XP_025000717
CGNC:
53050
Ensembl:
ENSGALG00000015589
LinkDB
All DBs
Position
Z:complement(64139943..64257224)
Genome browser
AA seq
1090 aa
AA seq
DB search
MPRGRRREQGGGGQPVLSRFFGVAESGAARHTASEVGIKRRTSTENNEPCEKKTKSLQST
IDDIYNLVKTQDKKEPQTYERPRICLQTLDRLREFYSDSDQPCNRVQEESFQEKQSVILE
KCPSITGRSLELKSPLQHGDTSPKVAQKEEPHCDLSQFSASFRSYENTSDINLNKRTKTI
YTPLELQFIEMKKRYKDAILCVECGYKYRFFGEDAEIASKELNICCHQDHNFMTASIPTH
RLFVHVRRLVAKGHKVGVIKQMETAALKAAGENKSSLFSRKLTALYTKSTLIGEDVNPLL
KLDDSVDVEEVTTDVPDNYLLCICENGENVKNRKKGDIVIGVMAIQPTTGEVVFDSFGDC
ASRLELESRLLRLQPVELILPSSLSDQSEKLINSVTSMRLRDDRIRVERMKNYHFEYSNA
FQLVTDFYAKEVPDITGPQKLSVILSLDKPVICALAAVITYLKEFNLEKMLYNPSNFKQL
SSETEYMTINGTTMKNLEILQNQTDLKTKGSLLWVLDHTKTSFGRRRLKKWVIQPLMKCS
EINARLDAVSEILLSESSVFGQIQNLLCKLPDLERGLCSVFHKKCSTQEFFLIVSTLSRL
DSEIQALVPVIHSHVKSPLLQNALLEIPELLSPVKHYLKILNEEAAKTGDKTQLFKDLTD
FPVIRKKKEEILDVLSKIQLHLLEIRKQIKNPSAEYVTVSGQEFLVEVKNSHISSVPSNW
VMVSSTKAVSRFHSPFITENYRHLNQLREQLVLDCGAEWLRFLDHFSEHYHTVSKAIGHL
ATIDCLFSLAQAAKQGDYCRPVVKDNQQEIIIKNGRHPVIDVLLGEQDQYVPNTTNLSRD
GERVMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEESTVGIVDGIFTRMGAADNIYK
GRSTFMEELTDTAEIIRRATSRSLVILDELGRGTSTHDGIAIAYATLEHFITDVESLTLF
VTHYPSVCELENVYPGKVGNYHMAFLVNKEESAEQKGSEEEENPEFVTFLYQITKGVTAR
SYGLNVAKLADIPEEILKKAAHKSKELERLVNVKRKKLKSFAEAWKINDFQELQKWRNMC
EPGDERKNSF
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgggcggcggcgggagcagggcggtgggggtcaaccggtgctgagccgcttc
ttcggcgtggcggagagtggtgccgcccggcacacggcttctgaagttggcataaaaagg
agaacatcaactgaaaacaacgagccatgtgagaaaaagaccaagtccctacaaagtact
atagatgacatctataatctggtgaagactcaggataaaaaagagcctcagacgtatgaa
aggccccgcatatgtttgcaaactctagacagactgagagaattctacagtgattcagac
cagccatgtaacagagtccaggaggaaagttttcaggagaaacaatcagttattttggag
aagtgtcccagtattactgggagaagtctggaactgaaaagccctcttcagcatggggac
actagcccaaaggttgctcagaaggaggagccacactgtgatcttagtcagttttctgca
tcttttagaagctatgaaaatacttcagacataaatctcaataagagaaccaaaaccatt
tacactccactggaacttcagttcatagaaatgaagaaacgatataaagatgctattttg
tgtgtggagtgtggatacaaatatcgcttctttggagaagatgcagagattgcgtctaaa
gagctaaacatttgctgtcatcaagatcataactttatgacagccagtataccaactcac
agactgtttgtccatgtgcgacggcttgtagcaaaaggacataaggttggagtaataaaa
caaatggaaactgcagcactgaaagctgctggagaaaataaaagctctctcttcagccgg
aaactgactgctctctatacaaagtctacccttattggagaagatgtgaaccctttgctg
aagctagatgattctgtagatgttgaagaggtaacaacagatgtccctgataactacctc
ctctgtatttgtgaaaatggagaaaatgtaaaaaacagaaagaaaggtgacattgttata
ggtgttatggcaatccaaccaactacaggagaagttgtttttgacagttttggggattgt
gcatctcgcttagaattagagagtcggcttttacgcctgcagccagttgaactaatactt
ccatccagcttgtcagatcaatctgaaaagctcatcaacagtgtaacctccatgaggtta
cgagatgacagaattagggtagaaaggatgaaaaactaccattttgaatacagtaatgct
ttccaactggttactgatttttatgcaaaagaggtgcctgatattacaggtcctcaaaaa
ctatctgtaatactaagcttggataagcctgttatttgtgctctggcagcagtaattaca
tacctgaaagaatttaatttggaaaagatgctttacaatccaagcaatttcaaacagttg
tcaagtgaaactgaatacatgacaattaatgggacaacaatgaaaaatcttgaaatttta
cagaatcagactgatttgaaaacaaaaggaagcctgctctgggtcttggatcatactaaa
acttcctttggtcgtcggagactgaagaaatgggtaattcagccgctcatgaaatgcagt
gaaataaatgcccggcttgatgctgtgtctgaaattctcctgtcagaatccagcgtgttt
ggccagattcagaatcttctttgtaaactgccagatttagagagaggcctctgcagtgtt
tttcacaaaaagtgttcaacccaagagttcttcttgatagtcagcactctgtctcgtctg
gactcagaaattcaagctcttgttccagtcatacactctcatgtgaaatctcctctgtta
caaaatgcactgttggaaattccagaacttctctccccagtaaaacattatttaaagatt
cttaatgaagaagcagctaagactggagataaaacccaactattcaaagaccttacagat
ttccctgtcatcagaaagaaaaaggaagagatcctggatgtgctgtctaaaatccaatta
catcttctggaaattcgtaaacaaattaagaatccttctgcagagtatgttacagtttct
ggtcaagagtttttggtagaagtgaaaaattcgcatatatcatctgtgccatctaactgg
gttatggttagtagcacaaaagctgtcagccgcttccactctccttttattacagaaaat
tacagacatctgaatcagcttcgggagcagctagtccttgactgcggcgctgaatggctg
cgttttctagaccattttagtgaacattatcacactgtatctaaagcgattggtcaccta
gcaactatcgactgtctgttctcattggcacaggcagctaaacaaggagactactgcaga
ccagttgtgaaagataatcagcaagaaataattataaaaaatggcaggcaccctgtgatc
gatgtactactgggagaacaggatcagtatgttccaaacaccactaacctatcaagagat
ggtgaaagggtcatgataataactggacccaacatgggaggaaagagctcctatataaag
caagttgcattgatcacagtcatggcacagattggttcctacgttcctgcagaggaatca
acagttggtatcgtggatggtatttttaccagaatgggtgctgcagataacatttacaaa
ggccgaagtacctttatggaagaactgacagatactgctgagataataagaagagcaact
tcaagatcactagtcattttggatgaactgggaagaggaactagcacacatgatggaatt
gctattgcttatgctacacttgaacattttattacagatgtggagtcactaacgttgttt
gtcacccactatccttcagtttgtgagctagaaaatgtgtatccaggaaaagttggtaat
taccatatggctttcttggtgaataaggaagaaagtgctgaacagaaaggatctgaagag
gaagagaatcctgagtttgtcacttttctttaccaaataactaaaggagtcactgcaaga
agctatgggctaaatgttgccaaattggcagatattcctgaagaaatcttgaagaaggca
gctcacaaatcaaaggagttagagagattggtgaatgtgaagagaaaaaagctgaagtct
tttgccgaagcatggaaaataaatgattttcaggaactacagaaatggagaaatatgtgt
gaacctggagatgaaagaaagaacagtttttaa
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