Geobacillus sp. GHH01: GHH_c23950
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Entry
GHH_c23950 CDS
T02455
Symbol
sigF
Name
(GenBank) RNA polymerase sigma-F factor
KO
K03091
RNA polymerase sigma-E/F/G factor
Organism
ggh
Geobacillus sp. GHH01
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggh03021
]
GHH_c23950 (sigF)
Transcription machinery [BR:
ggh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GHH_c23950 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_3
HTH_Crp_2
MarR_2
HTH_31
HTH_28
KORA
HTH_37
DUF134
Trp_repressor
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
AGE22906
UniProt:
L8A1G6
LinkDB
All DBs
Position
complement(2398453..2399205)
Genome browser
AA seq
250 aa
AA seq
DB search
MDVDVKQDQSPIKDQEMKELIRRSQEGDQEARDEIIEKNMRLVWSVVQRFLNRGYEADDL
FQIGCIGLLKSVDKFDLSYDVKFSTYAVPMIIGEIQRFLRDDGTVKVSRSLKEMGNKIRK
AKDELSKTRGRAPTVTEIADHLGISPEDVVLAQEAVRSPTSIHETVYENDGDPITLLDQI
ADADEASWFDKIALKKAIEELDERERLIVYLRYYKDQTQSEVASRLGISQVQVSRLEKKI
LQHIKDKMDG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgatgtcaagcaagatcagtcgccaatcaaagatcaggagatgaaagagctg
atccgccgcagccaagaaggcgatcaagaagcgcgtgatgaaattattgaaaaaaacatg
cgcctcgtctggtcggtcgttcaacgttttttaaaccgcggctatgaagcggacgacttg
tttcaaatcggctgcatcggcttgttaaagtcggtcgacaagtttgacctgtcgtatgac
gtcaagttttcgacgtacgccgtgccgatgatcattggggagattcagcggtttcttcgc
gacgacggcaccgtcaaagtgagccgttcgctgaaagagatgggcaacaaaatccgcaag
gcgaaagatgagctgtcgaaaacgcgcgggcgggcgccgacggttacggaaatcgccgac
catttaggcatttcgccagaagacgtcgttctggctcaagaggcggtccgctcgccgaca
tcgattcacgaaacggtgtacgaaaacgacggcgatccgattacgttgcttgatcaaatt
gctgacgccgacgaagcgtcatggtttgacaaaatcgccttaaaaaaagcgatcgaagaa
ctcgacgagcgtgagaggctgatcgtctatttgcgctattacaaagaccaaacccagtcc
gaagtggcatcgaggctcggcatctctcaagtgcaagtatcccggctggaaaagaaaata
ttgcagcacataaaggacaaaatggacggatag
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