Geobacillus sp. GHH01: GHH_c24200
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Entry
GHH_c24200 CDS
T02455
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ggh
Geobacillus sp. GHH01
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ggh03016
]
GHH_c24200 (rnz)
Enzymes [BR:
ggh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
GHH_c24200 (rnz)
Transfer RNA biogenesis [BR:
ggh03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
GHH_c24200 (rnz)
Prokaryotic type
GHH_c24200 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AGE22931
UniProt:
L8A1K3
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All DBs
Position
complement(2418310..2419233)
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AA seq
307 aa
AA seq
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MELLFLGTGAGVPAKERNVSSVALQLLGERGATWLFDCGEATQHQILHTAIRPRRIEHIF
ITHLHGDHLFGLPGLLGSRSFQSGETPLTVFGPKGIRAFVETALAVSGTKLRYELNIVEI
DEGVIFDDERFSVIAKRLDHGMPSYGFRVVEKDLPGPLLVERLQALGVRPGPIYQEIKQG
KTVVLDDGTVIDGREFVGPPQKGRIVAVLGDTRFCEAAIELARDADVVVHEATFAAAEQR
LAHDYFHSTTTDAAEVARRAGAKRLILTHISSRYQGEAALQLVAEARSVFPNTELAVDFA
SFSIPRG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttggaactgttgtttttaggcacgggtgccggcgtgccggccaaagagcgcaacgtatcg
tccgtcgccctgcagctgcttggcgaacgcggggcgacatggctgtttgactgcggcgaa
gcgacgcagcatcaaattttgcataccgccattcgcccgcgccgcatcgagcatattttt
attacgcacttgcatggcgaccatttgttcggattgcctggactgctaggcagccgttcg
tttcaaagcggcgagacgccgcttacggtcttcggcccaaaaggcattcgcgcgtttgtc
gaaacggcccttgccgtcagcgggacaaagctccgctatgaactgaacattgtggagatc
gatgagggcgtcatttttgacgatgaacggttttccgtcatcgccaaacggctcgatcac
ggcatgccgtcatacggtttccgcgtcgttgaaaaagatttgcccggcccgctcttggtc
gagcgattgcaagcactcggcgtccgccccggcccgatttatcaagaaattaagcaagga
aaaacggtcgtgctggatgacggcacggtcatcgacgggcgcgaatttgtcgggccgccg
caaaaggggagaatcgtcgccgtgttgggcgatacccgtttttgcgaagcggcgattgaa
ctcgcccgcgatgccgatgtcgtcgtccacgaggcgacgtttgccgcggcggaacagcgg
ctggcccatgactatttccattccacgaccacagacgcagccgaggtggcgaggcgggcc
ggggcgaagcggcttattttgacccatatcagctctcgctaccaaggtgaggcggcgctg
cagctcgtcgccgaggcgcgcagcgtgtttccgaacaccgagctcgccgttgatttcgcc
tcgttttcgatcccgcgcggttaa
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