KEGG   Grimontia hollisae: AL542_10920
Entry
AL542_10920       CDS       T04260                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
gho  Grimontia hollisae
Pathway
gho03030  DNA replication
gho03430  Mismatch repair
gho03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gho00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AL542_10920
   03430 Mismatch repair
    AL542_10920
   03440 Homologous recombination
    AL542_10920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gho03032]
    AL542_10920
   03400 DNA repair and recombination proteins [BR:gho03400]
    AL542_10920
Enzymes [BR:gho01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AL542_10920
DNA replication proteins [BR:gho03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AL542_10920
DNA repair and recombination proteins [BR:gho03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AL542_10920
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AMG30824
UniProt: A0A377HJK5
LinkDB
Position
1:complement(1518482..1519105)
AA seq 207 aa
MNPLERLWLKYKWRDTQYAPLFTSPSNEEMVALDCETTSLDPHKAELVTIAATKIRGNTI
VTSDPLTLSLRAPHSLTEQSVKIHGIRHQDLHDGVTEKEAMQALIEFAGNRPIVGYYIHY
DKTILDRYTRKHLGFKLPNSTIEVSDIYRRKLEQILPNAYYDLSMEAIGHHLGLPLSGRH
DALDDAISAALIYIRLKYGDVSIPTYV
NT seq 624 nt   +upstreamnt  +downstreamnt
atgaacccgctggaacgactctggctgaagtataaatggcgagatacccaatatgcgccg
ctgtttacctctccttccaatgaagagatggtcgcgctggactgtgaaaccaccagcctc
gacccccataaggccgagctggtgaccattgcggcaaccaaaatccgcggcaacaccatt
gtcaccagcgatccactcaccctttccctgcgcgccccccactccctgactgaacaatca
gtgaaaatacacggtatccggcatcaggatctacatgatggtgtcacggaaaaagaagcc
atgcaggcactgattgaatttgccggtaaccgccccatcgtcggctattacatccattac
gacaaaaccattctcgatcgctacacccggaagcacctgggcttcaaactgccaaacagc
accatcgaagtcagtgatatttaccgtcgcaaactggaacagatcctgcccaatgcttat
tacgatttgagtatggaggcaataggacaccatctgggattgcctctgtctggccgacat
gatgcactcgacgacgccatcagtgctgcccttatctatatacgactaaagtacggcgat
gtctcaatacccacttatgtctaa

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