Gekko japonicus (Schlegel's Japanese gecko): 107117543
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Entry
107117543 CDS
T04299
Symbol
SIX5
Name
(RefSeq) SIX homeobox 5
KO
K19474
homeobox protein SIX5
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gja03000
]
107117543 (SIX5)
Transcription factors [BR:
gja03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
107117543 (SIX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
107117543
NCBI-ProteinID:
XP_015275166
LinkDB
All DBs
Position
Un
AA seq
902 aa
AA seq
DB search
MASFPAEPASSAGRSEAEGGGGEPRKLVQTLAPAPSPQAPPGSGGSEAGAAAAAAAAAAT
AAALPSPSSPPPPRFSPEQVSCVCEALLQAGDPGRLGRFLGSLPADEARRLEAQPGAAGE
SLAKARALLAFQRGDFAELYRLVQSRPFGAPHHPFLQDLYLRARYREAEAARGRALGAVD
KYRLRKKFPLPGTIWDGEETVYCFKRRSRAALRDSYGRSRYPSPEQKRRLARDTGLSLTQ
VSNWFKNRRQRDRSGGGQGGGGGGGAGGTPSKSESDGNPSTEDESSHGPEETEAAVGVPA
MPEGIPASGGLFLPAACSSASSILLNGNFITASSPTMLLNGGSVIQTPSGGVILNGLALG
ENQTITLSPVAAPSPPVLLNGSATLLSGKTSVANSQEVSKAPQESLPSAAVILSPPGEVK
SETAEALVYGVGVKSEEGPAAAPHLLTLPDASTLLSDHKGTLLTAVPMSQVVPSDEDAPP
AAQLPPVAQPASTSSPQIVPLAKLISGTQALSSPQVTVATAGGQVALPPPPPATAATPLL
SIPGSSPAQATVLHVPAPSLLPLAQVSPPSQVVPLSQPVSGSQVLSPSQMVPMSPTQIYT
VPQGASAPQLVSLPQVAQGSQIISLPQVVPTSQVVTLQQGVGSPIQILTSAAPIKVGPVG
GTPQAPTSCGSLSHSNVHLINTNVSMTALQLPGTTPGNILLTNPVTGGGTIVTGMALQQG
KLILTATFPASMLMAPILSGPAGPALALPIKQEVATTPPAALEDHDAGNMLLPGISPVLP
SAVPSLSASDSPGSPELAFGTDSGQTNLLSSFSQPDGLTMSQQQVVWSGPVGMDLQGPSS
EGLFEMDKGPLEGQSGLLRLPEGEGLLLDASGGDPMDPEALDSDEKVLTQLQSVPVEEPL
DL
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttccctgcggagcccgcctcgtcggccggccgaagcgaggccgagggcggc
gggggcgagccgcgcaaacttgtgcaaactttggcgcccgccccttcgccccaggctcct
cccggcagcgggggaagcgaggcgggcgcggcggcggcggcggcggcggcggctgcaacg
gcagcggcgttgccttctccgtcttccccgccgccgccgcgcttctccccggagcaggtc
tcgtgcgtgtgcgaggcgctgctgcaagccggcgacccgggccgcctgggccgcttcctg
ggctcgctgccggccgacgaggcgcgccgcttggaggcgcagccgggcgcggcgggcgag
agcctggccaaggcgcgggcgctgctggccttccagcggggggacttcgccgagctgtac
cgcctggtgcagagccggcccttcggcgcgccccaccacccgttcctgcaggacctctac
ctgcgcgcccgctaccgggaggccgaggcggcgcggggccgggcgctgggcgccgtcgac
aagtaccgcctgcgcaagaagttccccctgcccggcaccatctgggacggcgaggagacc
gtctactgcttcaagcggcgctcgcgggccgccctccgcgactcctacggccgcagccgc
taccccagcccggagcagaagcgccgcctggcccgcgacaccggcctctcgctcacccag
gtcagcaactggttcaagaaccggcgccagagggaccgcagcggcggcggccagggagga
ggaggaggaggcggcgccggcggcacgcccagcaagagcgaatccgacgggaaccccagc
acggaggacgagtccagccatggccccgaggaaaccgaagccgccgtgggggttccggcc
atgcccgaagggattcctgcctctggcggcctcttcctgccggccgcctgttccagcgcc
tcttccatccttctgaacggcaacttcatcactgccagctccccgactatgctcctcaat
ggaggatcggtgatccagacccccagcggaggcgtcatcctgaacgggttggctctcggg
gagaaccagaccatcaccctgagccccgtggcggcacctagcccgcccgtcctcctgaat
ggctctgctaccttgctgagcggcaaaacctcggtcgccaacagccaggaggtctccaag
gcgccgcaggaatccctcccctcagccgccgtcatcctcagccctcctggggaggtgaag
tccgaaaccgccgaggcgctggtgtatggcgtgggagtgaagtccgaggaggggccggcg
gctgccccgcaccttctgactctcccagacgcctccacgctcctctctgaccacaagggc
accttgttgacggccgttcccatgtctcaagtcgtcccatcggatgaagatgctccccca
gccgctcagctgcccccggtggctcagccggcctccacgtccagcccccagatcgttcct
cttgctaaactaatctctggcactcaagccctgtccagcccccaggtgacagtggcaaca
gccggtgggcaggtcgctttgccgccgcctcctccagcgactgcagctacgcccctcctt
tccattccgggctcctccccagcccaggctaccgtcctccacgttcccgccccttctctg
ctccccctcgcccaagtttcgcccccctcccaggtcgtgcctttgtcccagcccgtttcg
ggctcccaagtgctctccccgtctcagatggtgcccatgtcccccacgcagatttacacg
gtgccccagggggcctccgcccctcagctcgtctccctcccccaagtggcccaggggtcc
cagattatttctcttccccaagtggtgcccacctcccaagtcgtgacactgcagcagggc
gtgggcagcccgatccagatcctgaccagcgccgcccccatcaaggtggggcccgtggga
gggacgccgcaggcgccgacgtcgtgtgggagcctcagccacagcaatgtgcacctcatc
aacaccaacgtgagcatgacggcccttcagcttccaggcacgacaccagggaacatcctc
ttgacaaacccagttacaggcggcggcaccatcgttacgggcatggctctgcagcagggc
aagctcatcctgaccgccacctttcccgccagcatgttgatggcgcccatcctgtccggt
ccagcaggcccagccctggccctgcctatcaagcaggaagtggccacaacaccaccggca
gctctggaagaccacgacgccggcaacatgctgctccctgggatcagccccgtcctgcct
tctgccgtcccctctctttcagcctcggacagccccgggtcaccggaactggcgttcggc
acagactctggccaaaccaacctcctttcgagcttctcccagcctgacggcctgacgatg
tcccagcagcaggtggtctggtccggcccggtcggcatggacctccaagggcccagctcc
gaggggctgttcgagatggacaagggtcccttggaagggcagagcggcctgcttcggctc
ccagagggggagggcctcttactggatgcctccggcggtgaccccatggatcccgaggca
ctcgactctgacgagaaggtactgacccagctgcagtccgttccggtggaagagcctctg
gacttgtaa
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