Trichlorobacter lovleyi: Glov_1066
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Entry
Glov_1066 CDS
T00708
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
glo
Trichlorobacter lovleyi
Pathway
glo03420
Nucleotide excision repair
glo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
glo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Glov_1066
03430 Mismatch repair
Glov_1066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
glo03400
]
Glov_1066
Enzymes [BR:
glo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Glov_1066
DNA repair and recombination proteins [BR:
glo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Glov_1066
MMR (mismatch excision repair)
Other MMR factors
Glov_1066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACD94789
UniProt:
B3E665
LinkDB
All DBs
Position
1108731..1111877
Genome browser
AA seq
1048 aa
AA seq
DB search
MNRLTTDFKAVYQRLNQAQRKAVDTLEGPVLVIAGPGTGKTEILAARIANILLSTDATPE
SILCLTYTDAGTVAMRNRLLQFIGPNAYRVDIFTFHAFCNLVIQENADYFGLRSLTTISE
LEQFRFVREIIDAFPHEHPLTRSTGDIHFESDRLLALYEIMKKEDWSADWLAARVDAYAA
TLPDNPDFLYKRQTRASDGTVYKKGDLNERKLREELRKLEQLKAAARSFDDYQQLLKERG
RYDFADMILWCSAAFKQNADLLATYQERYLYLLVDEFQDTSGSQFELLMQLADYWDAPNL
FVVGDDDQSIFRFQGASVENIRRFVERYRPSLTTVTLTDNHRSSQLILDGAGALIGRNQE
RLSDEKQLIAMNPEVAALPEPPQLEGYATLAHETVAIANRIGALLDAGVLPEQIAVIYRN
HSQSEEIIRYLTARGVAVQTRRRADILQEPLILKLMNVLRYLATELERPHSGERLLFEIL
HEPWFGVPPLALARLSVEIARQRTEKRPSYWREQLPLRGMDKGQQALFPASDDLHLRQAG
ETIEELLRDAATMTLQELLHHVITRLGILAQALSAHERVWHLELLNTLFDFVREETAKQP
LSLPELLAMLADMQRQGISLAVEKLSYTGAGVNFLTAHGSKGLQFDHVFMLGCTRGVWDS
ASRNRTYSMPPTIWSGPAGSEEEESRRLFYVAMTRARKQLVISWPERDNKEKELEKSRFV
AELAESGGGSIRQHVLSDDELLAFGNAVLQALPARLPAELIDDAFVDSLLQKYSLSVTHL
NSYLRCPLSFYFNTLLRVPAPMSSALTFGSAVHHALEQLFRKMKADPAGRFPTADVFVED
FRWFMRRHEEGFTPAEFRRRLEYGETILPGFYAAHHAGWKRDALVEYPFRNILMDGIPLN
GKLDMLEFSGNHVTVVDYKTGNPQNARKKLNPPDPEKVAKALAEGREPHDDDRLGGDYWR
QAVFYRILVEHEPRRSWVMTSARFEFVEPEKESGEFRSARFEVSDDEVAQVRQQVKEVYA
KIQAKQFHNGCGKPECEWCSFVKRFEGR
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaacagactgaccactgatttcaaagctgtctatcagcggctgaaccaggcccagcgc
aaggctgtggacacccttgaaggtccggtgctggtgattgccggtcccggaaccggcaag
accgagatcctggcggcccggatcgccaatattctgctttccaccgatgccacgccggag
agtatcctctgtctgacctacaccgatgccggtaccgtggcgatgcgcaaccggctgctg
cagttcatcggtcccaatgcctaccgggtggatatcttcacctttcatgccttctgcaac
ctggtgatccaggaaaatgccgattatttcggcctgcgcagcctgaccaccatctcggag
ctggagcagttccgttttgtgcgggagatcattgatgcctttccccatgaacatcccctg
acccgctccaccggcgatatccattttgagtcggaccggttactggcgctgtacgagatc
atgaagaaggaagactggtccgccgactggctggctgcccgggtggatgcctatgccgcc
accctgccggataatcctgattttctctacaaacgtcagaccagggccagtgacggtacg
gtctataaaaaaggtgatctgaacgagcggaagctgcgggaggaactgcgaaaacttgag
cagttgaaggcagcggcccgaagttttgatgactaccagcagctgctgaaagagcgggga
cgctacgactttgccgacatgatcctctggtgcagtgccgccttcaaacagaatgccgac
ctgctggccacgtatcaggaacgctacctctacctgctggtggatgaatttcaggatacc
agcggttcccagtttgagctgctgatgcagctggctgattactgggatgcccccaacctg
tttgtggtgggggatgacgaccagtcgatcttccgcttccagggggccagtgtcgagaac
atccggcgttttgtggagcgttaccgtccgtcacttaccacagttaccctgaccgacaac
caccgttcctcgcagttgattctggacggggcgggggcgttgatcggtcgtaatcaggaa
cgtctgagcgatgaaaaacagctgatcgccatgaacccggaagtggctgcactgccggag
ccgccgcaactggaggggtacgccaccctggcccacgagaccgtggcgattgccaaccgg
atcggggcgctgctggatgccggggtgctgccggaacagatcgcggtgatctaccgcaac
cacagccagtcagaggagatcatccgttacctgacggcccgcggggtggcggtacagacc
cggcggcgggccgatatcctgcaggaaccgctgattctcaagctgatgaacgtgctgcgc
tatctggccactgaactggaacggccccattccggtgaacggctgctgtttgagatattg
catgaaccctggttcggggtaccacctctggccctggccaggctgtcggtggagatcgcc
cggcagcggaccgagaaacgtcccagctactggcgtgagcagttgccgctgcggggaatg
gacaagggacaacaggccctgtttccggccagcgatgacctgcacctgcgtcaggccggc
gagaccattgaagaactgctgcgggatgctgccaccatgaccctgcaggagctgctgcac
catgtcatcaccaggctggggattctggcccaggccctgtcggcccacgaacgggtctgg
catcttgaactgctgaacaccctgtttgacttcgtgcgggaggaaaccgccaaacagccg
ctgtcgctgcccgagctgctggccatgctggctgatatgcaacgccaggggatcagtctg
gccgtggaaaagctcagctataccggcgccggggtcaacttcctgaccgcccatggctcc
aaggggttgcagtttgaccatgtcttcatgctgggctgtacccgtggtgtctgggacagt
gcctcccgcaaccgtacctacagcatgccccctaccatctggtccggcccggccggcagt
gaggaggaggaatcgcgccgtctgttctatgtggccatgaccagggcccgcaaacagctg
gtgatctcctggccggagcgggacaacaaggaaaaagagctggagaagagccgttttgtg
gctgaactggcagaaagcgggggcggcagcatccgccagcacgtgctgagtgacgacgaa
ctgctggcctttggcaatgccgtgttgcaggcactaccggcacggcttcctgccgaactg
attgacgacgcctttgtggacagtctgctgcagaagtattccctcagtgtcacccacctg
aacagctatctgcgctgtccgctctccttctacttcaacaccctgctgcgggtgccggca
ccgatgagttctgccctgaccttcggctcggcggttcatcacgccctggaacagctcttc
cgcaagatgaaggcagatccggccggacggtttcccactgcggatgtctttgtggaggat
ttccgctggttcatgcgtcggcacgaggagggctttaccccggcagagttcaggcgcagg
ctggagtatggcgagacgatcctgcccggcttttacgctgcccaccatgccggctggaaa
cgggatgcgctggttgagtaccccttccgcaacatcctgatggacggtatcccgctgaac
ggcaaactggatatgctggagttttcgggcaaccatgtcacggtggtggactacaagacc
ggcaacccccagaatgcgcgcaagaagctgaatccgcccgacccggagaaggtcgccaag
gcgctggctgaaggcagggaaccgcatgatgatgaccggctgggcggtgattactggcga
caggcggtcttctaccggattctggtggaacatgagccacgccgcagctgggtgatgacc
tcggcccgcttcgagtttgtagagccggaaaaggaaagcggcgaattccggtcggcccgc
tttgaggtctcggatgatgaggtggcccaggtcaggcagcaggtcaaagaggtctacgca
aagattcaggccaaacagtttcacaacggttgcggcaaaccggaatgtgaatggtgcagc
tttgtaaagcggtttgaaggacgctga
DBGET
integrated database retrieval system
