Gloeocapsa sp. PCC 7428: Glo7428_0681
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Entry
Glo7428_0681 CDS
T02400
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
glp
Gloeocapsa sp. PCC 7428
Pathway
glp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
glp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Glo7428_0681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
glp03021
]
Glo7428_0681
Transcription machinery [BR:
glp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Glo7428_0681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_8
Sigma70_r4_2
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
AFZ29273
UniProt:
K9X9V9
LinkDB
All DBs
Position
752123..753277
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AA seq
384 aa
AA seq
DB search
MNIAELNAIDSLLTTATDSDINSADLEEPSPENLAEVASDLSPIEQNLEVEDKDEDLATA
RPSGYQKTKSDDAVGAFFKEMARYPLLKPEEEVELARRVKFIVEFEEIQQRLQAEIKRQP
NKAEVATLLGMSERQLEHRLYQGRVAKRKMIRSNLRLVVSIAKRYLNRGLPFLDLIQEGA
MGLNRAAEKFDPDKGYKFSTYAYWWIRQAITRAIANDARTIRLPIHIVEKLNKLKKAQRE
LKQQLQRNPSEVELAQFLEISAEHLRQLLQLRRKSLSLNHRVGKEEDTELVDLLEDEDSQ
SPEQQMSETMMRQEIWDVLGDVLTPREKDVISLRYGLITSEPCTLEEVGSIFNLSRERVR
QIQSKAMRKLRRPQIAKRLKGWLF
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgctgaattaaacgcaattgattccctgttaacaacagcaacagatagtgat
attaatagtgctgatttagaagaaccatctccagaaaatttagcagaagtcgcatcagat
ttatctccaatagaacagaatttagaagtagaagacaaagacgaagatttagctacggca
agaccttcaggttatcagaaaactaaatctgacgatgctgtaggtgccttctttaaagaa
atggcacgctatcctttacttaaaccagaggaagaagtagaactagcacggcgagtcaag
tttatcgttgaatttgaagaaatacaacagcgcttgcaagcagaaataaagcgccagccg
aataaagcagaagtggcaactttgttaggaatgtcagagcgtcagttggaacaccgacta
tatcaaggacgcgtagcaaagcggaaaatgattcgctccaatctgcgtttagtcgtctca
attgccaagcgctatttaaatcgcggtttaccttttttagatttaattcaagaaggcgca
atggggttaaaccgtgcagcagaaaaattcgatcctgataaaggatacaagttttctact
tatgcttattggtggattagacaagcaattacgcgggcgatcgcaaatgatgctcgcaca
attcgattgccaattcacattgtagaaaagttaaacaaactcaaaaaagcacaacgcgaa
ctcaaacaacaactacaacgcaatccctcagaagtagaacttgctcaatttttagaaatc
tcagcagagcatttgcgtcaactgctacaactacgacgcaaatcactttctttaaatcac
cgagttggtaaagaagaagatactgaattagtagatttgttagaagacgaagacagccaa
tcgccagaacaacaaatgagcgaaacaatgatgcgtcaggaaatttgggatgttttagga
gatgttttgactcctagagaaaaagacgttatttcgctacgctatggtttgattacaagt
gaaccgtgtactttagaagaagttggcagtatatttaatctttcccgcgaaagagtccgc
caaattcaaagtaaagctatgcgcaagttacgtcgtcctcaaattgctaaacgcctaaaa
ggatggttgttctag
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