KEGG   Geobacillus sp. Y4.1MC1: GY4MC1_0824
Entry
GY4MC1_0824       CDS       T01348                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
gmc  Geobacillus sp. Y4.1MC1
Pathway
gmc03030  DNA replication
gmc03430  Mismatch repair
gmc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gmc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GY4MC1_0824
   03430 Mismatch repair
    GY4MC1_0824
   03440 Homologous recombination
    GY4MC1_0824
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gmc03032]
    GY4MC1_0824
   03400 DNA repair and recombination proteins [BR:gmc03400]
    GY4MC1_0824
Enzymes [BR:gmc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GY4MC1_0824
DNA replication proteins [BR:gmc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GY4MC1_0824
DNA repair and recombination proteins [BR:gmc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GY4MC1_0824
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C HROB tRNA_anti_2
Other DBs
NCBI-ProteinID: ADP73639
UniProt: A0A7U3YD61
LinkDB
Position
824005..827319
AA seq 1104 aa
MSFVHLHVRSCYSLLTSPAKINDLVKKAKDLQFPALALTDENVLYGAIPFYIECKRNGIQ
PIIGMITDIVLEGEEAYPLVLLAKNETGYQHLMKISSTIQTKTREGIPEKWLWHYRSGLI
ALTPGKSGQIETLLAHGEIIKAKQVLERYKQIFGENFYLSVQRGENKRKEPYEQQLIALG
EETNTPLVATNDVQYIEKEDAFVHRCLLAVKQGTVIETETAAAGERYLTPPEEMTERFSD
LPAAVENSGKIAEQCHLDIEFGSLKLPKYPVPTKESADDYLRRLCMEGLHERVPSPSDRY
RERLEYELSVIRQMGFSDYFLIVWDFMNFARKQGIVTGPGRGSAAGSLVAYTLYITNVDP
IQYGLLFERFLNPERVSMPDIDIDFPDDRREEVIQYVANKYGQQYVAQIITFGTFGAKAA
LRDIGKVLQIDAKEMASILKHVPNKHGITIQEAYDQSAAFRQAVQSSALIKRWVATAMKV
EGLPRHTSTHAAGVIISSEPLSQIVPLQQGHGELYLTQYPMDVLERLGLLKMDFLGLRTL
TLLEHICRLIRQQTGETIDVREIPLHDRKTYELVSEGDTNGIFQLESDGMKRVLKQLKPS
QFEDIVAVNALYRPGPIDYIPSYIRRKHGEEKAAYLHPDLAPILAPTYGVLIYQEQIMQI
AAKIAGFSLGKADLLRRAVAKKKKEILDQQRNAFIKGCMEKGYDESFANDLYDMIVRFAD
YGFNRSHAVAYSMLSYQLAYLKAHYPLYFYAALLTSVIGDEEKVALYVYEARQKRIELLP
PSVNQSRYSFSVEQGKIRYSLAAVKHVGAAAVKAIVQERKKGPFSDFFDFCVRLFGKGIN
RKTIESLVLSGCFDEFGVERAALLASIDVALEHAQLVGPYVEEGMFSDISLKPKYVEAPA
FSLEEKLMHEKELLGVYVSPHPTSAHRKMFRLAGARPVMSIIREKADRLVKAGVYIAQER
KTRTKKGEEMSFLTISDESGEMDAVAFPDVYRRYASVLKKGEVQLLEGKVEIRAGKPQFV
IRKVLAPALAAALYVKIDPEQIAAGTLFALKELLQKHHGNNPVFLYYEQEQKMVKLSEEY
NVELTDECIAALKALLGDDHIVVK
NT seq 3315 nt   +upstreamnt  +downstreamnt
ttgtcgtttgttcaccttcatgttcgcagctgctatagcctgctaacaagcccagcaaaa
atcaatgatttagtcaaaaaagcgaaagacttgcaatttcctgcgttagcattaaccgat
gaaaatgtattgtacggagcgattcctttttacatagaatgcaaacgtaacggcattcag
ccgattattgggatgatcacggacattgtgcttgaaggggaagaggcatatccgctcgtt
ttattggcaaaaaatgaaacaggctaccaacatttaatgaaaattagcagtacaattcaa
acgaaaacacgcgaaggaattcccgaaaaatggctatggcattaccgcagcggattaatt
gcgctaaccccgggaaaaagcgggcaaattgaaacattgcttgcccatggcgaaataata
aaagcaaagcaagtattagaacggtataagcaaatttttggggagaacttttacctttct
gtgcagcgcggggaaaataagcggaaagagccgtatgaacagcaattgattgcgttaggg
gaagaaacgaatacaccgcttgtggcgacgaatgacgttcaatatatcgaaaaagaagac
gcgtttgtgcaccgttgtttattggcggtaaaacaagggactgtaatagaaaccgagact
gcggcagcgggggagaggtatttaacaccgccagaagaaatgacggagcggttttccgat
ttgcctgcggcggtggaaaacagcgggaaaatcgcggaacaatgccatcttgacattgaa
tttggctcgctgaagctgccgaaatatcccgtgccaacgaaggaaagcgctgacgattat
ttgcgccgcctttgcatggaagggctacatgaacgggtgccttctccttctgaccgttac
agggaacggctcgaatatgaacttagtgttattcgacaaatggggttcagcgactatttt
ttgatcgtttgggattttatgaatttcgccagaaaacaagggattgtcacagggcctggg
cgaggatcggcggcaggatcgcttgtagcatacacgctttatataacaaacgttgatccg
attcaatacggcctcttattcgagcggtttttaaatccggaacgtgtgtcgatgccagat
atcgatattgattttccggatgaccggcgcgaagaagtcattcaatacgttgccaataag
tacggacaacaatatgtggcgcaaatcatcacgttcggcacattcggcgccaaggcggcc
cttcgcgacattggaaaagtgttgcagatcgatgcgaaagagatggcaagcatcctaaag
cacgttcctaacaaacacggaattacgattcaagaagcatatgatcaatcggctgctttt
cgccaagcagtccagtcttccgctttgattaaacgatgggttgccacggcaatgaaagtg
gaagggcttccgcgccatacctcgacgcacgcggctggtgtgatcattagcagcgagccg
ctttcgcaaatcgttccgttgcaacaagggcatggcgaattatatttaacgcaatatccg
atggatgtgttggagcggctcggtctattaaagatggattttcttggcttgcgcacatta
acattgcttgaacatatatgccgccttattcggcagcaaacgggcgaaacgatcgatgtg
cgggagatcccgcttcatgaccgcaagacgtatgaattagtgagcgagggggacacaaat
ggaatttttcagttagagtccgatggcatgaagcgcgtgttaaaacagctaaagccgtcg
caattcgaggatatcgtggcggtgaacgcgctgtaccggccgggcccgatcgattacatc
ccttcgtatataagaagaaagcacggagaagaaaaagctgcttatcttcatccagatttg
gcgccgattttagcgccgacatacggcgtccttatttatcaagagcaaattatgcaaatt
gctgccaagatcgcgggattttcgctaggcaaagcagatttgttgcgccgggcggttgcg
aaaaagaaaaaagaaattttggatcagcagcggaatgcgtttataaaaggctgtatggaa
aaaggttatgacgaatcgtttgccaacgatctatatgatatgatcgtccgctttgccgac
tacggatttaaccggagccatgccgtcgcttatagcatgctttcttaccagcttgcctat
ttaaaagcccattacccgctttatttctacgcggcgctgttaacgagcgtgatcggcgac
gaggaaaaagtggctttatatgtttatgaagcaaggcaaaagcggatcgaattgctgccg
ccttccgtgaatcaaagccgctattctttttcggttgagcagggaaagatccgctacagt
ctggctgcggttaaacacgttggagcagcggcggtgaaagcgattgtgcaagagcggaaa
aaagggcctttctccgacttttttgatttttgtgtccgcttatttggaaagggaatcaac
cgaaaaacgatcgaatctttggttttatccggatgctttgatgaatttggcgtcgaaaga
gcggcgctgttggcgagcatagatgtcgctttagagcatgcgcagcttgtcggcccgtat
gtcgaagagggaatgttttccgatatatcgctgaagccgaaatatgttgaagctcccgcc
ttttcgctggaagaaaagttaatgcatgaaaaagaactgctcggtgtttatgtttctccg
catccaacatctgcccaccggaaaatgtttcgtttggcgggagcgcggccggtgatgagc
ataataagagaaaaagcggaccgccttgttaaagccggagtgtatattgcgcaagagaga
aagacccgcacgaaaaaaggcgaggaaatgtcatttttgacgataagcgatgaaagcggg
gaaatggacgcggttgcgtttcctgatgtatatcgccgttatgcttctgttttaaaaaaa
ggggaagtgcaattattggaaggaaaagtagagattcgtgcgggaaagccgcaattcgtc
attcgcaaagtgttggctccagcgctcgccgcggcgctttacgtaaaaattgatccggag
cagatcgccgctggaacattgtttgcgttaaaagagctgttgcaaaagcatcacggaaac
aatcctgtgtttttatattacgaacaagaacaaaagatggtgaagctttcggaagagtat
aatgtggaattaacggatgagtgcatcgccgcgttgaaggcgctgctaggcgatgatcat
attgtagtaaaatga

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