Geobacillus sp. Y4.1MC1: GY4MC1_0824
Help
Entry
GY4MC1_0824 CDS
T01348
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gmc
Geobacillus sp. Y4.1MC1
Pathway
gmc03030
DNA replication
gmc03430
Mismatch repair
gmc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GY4MC1_0824
03430 Mismatch repair
GY4MC1_0824
03440 Homologous recombination
GY4MC1_0824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmc03032
]
GY4MC1_0824
03400 DNA repair and recombination proteins [BR:
gmc03400
]
GY4MC1_0824
Enzymes [BR:
gmc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GY4MC1_0824
DNA replication proteins [BR:
gmc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GY4MC1_0824
DNA repair and recombination proteins [BR:
gmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GY4MC1_0824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ADP73639
UniProt:
A0A7U3YD61
LinkDB
All DBs
Position
824005..827319
Genome browser
AA seq
1104 aa
AA seq
DB search
MSFVHLHVRSCYSLLTSPAKINDLVKKAKDLQFPALALTDENVLYGAIPFYIECKRNGIQ
PIIGMITDIVLEGEEAYPLVLLAKNETGYQHLMKISSTIQTKTREGIPEKWLWHYRSGLI
ALTPGKSGQIETLLAHGEIIKAKQVLERYKQIFGENFYLSVQRGENKRKEPYEQQLIALG
EETNTPLVATNDVQYIEKEDAFVHRCLLAVKQGTVIETETAAAGERYLTPPEEMTERFSD
LPAAVENSGKIAEQCHLDIEFGSLKLPKYPVPTKESADDYLRRLCMEGLHERVPSPSDRY
RERLEYELSVIRQMGFSDYFLIVWDFMNFARKQGIVTGPGRGSAAGSLVAYTLYITNVDP
IQYGLLFERFLNPERVSMPDIDIDFPDDRREEVIQYVANKYGQQYVAQIITFGTFGAKAA
LRDIGKVLQIDAKEMASILKHVPNKHGITIQEAYDQSAAFRQAVQSSALIKRWVATAMKV
EGLPRHTSTHAAGVIISSEPLSQIVPLQQGHGELYLTQYPMDVLERLGLLKMDFLGLRTL
TLLEHICRLIRQQTGETIDVREIPLHDRKTYELVSEGDTNGIFQLESDGMKRVLKQLKPS
QFEDIVAVNALYRPGPIDYIPSYIRRKHGEEKAAYLHPDLAPILAPTYGVLIYQEQIMQI
AAKIAGFSLGKADLLRRAVAKKKKEILDQQRNAFIKGCMEKGYDESFANDLYDMIVRFAD
YGFNRSHAVAYSMLSYQLAYLKAHYPLYFYAALLTSVIGDEEKVALYVYEARQKRIELLP
PSVNQSRYSFSVEQGKIRYSLAAVKHVGAAAVKAIVQERKKGPFSDFFDFCVRLFGKGIN
RKTIESLVLSGCFDEFGVERAALLASIDVALEHAQLVGPYVEEGMFSDISLKPKYVEAPA
FSLEEKLMHEKELLGVYVSPHPTSAHRKMFRLAGARPVMSIIREKADRLVKAGVYIAQER
KTRTKKGEEMSFLTISDESGEMDAVAFPDVYRRYASVLKKGEVQLLEGKVEIRAGKPQFV
IRKVLAPALAAALYVKIDPEQIAAGTLFALKELLQKHHGNNPVFLYYEQEQKMVKLSEEY
NVELTDECIAALKALLGDDHIVVK
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtttgttcaccttcatgttcgcagctgctatagcctgctaacaagcccagcaaaa
atcaatgatttagtcaaaaaagcgaaagacttgcaatttcctgcgttagcattaaccgat
gaaaatgtattgtacggagcgattcctttttacatagaatgcaaacgtaacggcattcag
ccgattattgggatgatcacggacattgtgcttgaaggggaagaggcatatccgctcgtt
ttattggcaaaaaatgaaacaggctaccaacatttaatgaaaattagcagtacaattcaa
acgaaaacacgcgaaggaattcccgaaaaatggctatggcattaccgcagcggattaatt
gcgctaaccccgggaaaaagcgggcaaattgaaacattgcttgcccatggcgaaataata
aaagcaaagcaagtattagaacggtataagcaaatttttggggagaacttttacctttct
gtgcagcgcggggaaaataagcggaaagagccgtatgaacagcaattgattgcgttaggg
gaagaaacgaatacaccgcttgtggcgacgaatgacgttcaatatatcgaaaaagaagac
gcgtttgtgcaccgttgtttattggcggtaaaacaagggactgtaatagaaaccgagact
gcggcagcgggggagaggtatttaacaccgccagaagaaatgacggagcggttttccgat
ttgcctgcggcggtggaaaacagcgggaaaatcgcggaacaatgccatcttgacattgaa
tttggctcgctgaagctgccgaaatatcccgtgccaacgaaggaaagcgctgacgattat
ttgcgccgcctttgcatggaagggctacatgaacgggtgccttctccttctgaccgttac
agggaacggctcgaatatgaacttagtgttattcgacaaatggggttcagcgactatttt
ttgatcgtttgggattttatgaatttcgccagaaaacaagggattgtcacagggcctggg
cgaggatcggcggcaggatcgcttgtagcatacacgctttatataacaaacgttgatccg
attcaatacggcctcttattcgagcggtttttaaatccggaacgtgtgtcgatgccagat
atcgatattgattttccggatgaccggcgcgaagaagtcattcaatacgttgccaataag
tacggacaacaatatgtggcgcaaatcatcacgttcggcacattcggcgccaaggcggcc
cttcgcgacattggaaaagtgttgcagatcgatgcgaaagagatggcaagcatcctaaag
cacgttcctaacaaacacggaattacgattcaagaagcatatgatcaatcggctgctttt
cgccaagcagtccagtcttccgctttgattaaacgatgggttgccacggcaatgaaagtg
gaagggcttccgcgccatacctcgacgcacgcggctggtgtgatcattagcagcgagccg
ctttcgcaaatcgttccgttgcaacaagggcatggcgaattatatttaacgcaatatccg
atggatgtgttggagcggctcggtctattaaagatggattttcttggcttgcgcacatta
acattgcttgaacatatatgccgccttattcggcagcaaacgggcgaaacgatcgatgtg
cgggagatcccgcttcatgaccgcaagacgtatgaattagtgagcgagggggacacaaat
ggaatttttcagttagagtccgatggcatgaagcgcgtgttaaaacagctaaagccgtcg
caattcgaggatatcgtggcggtgaacgcgctgtaccggccgggcccgatcgattacatc
ccttcgtatataagaagaaagcacggagaagaaaaagctgcttatcttcatccagatttg
gcgccgattttagcgccgacatacggcgtccttatttatcaagagcaaattatgcaaatt
gctgccaagatcgcgggattttcgctaggcaaagcagatttgttgcgccgggcggttgcg
aaaaagaaaaaagaaattttggatcagcagcggaatgcgtttataaaaggctgtatggaa
aaaggttatgacgaatcgtttgccaacgatctatatgatatgatcgtccgctttgccgac
tacggatttaaccggagccatgccgtcgcttatagcatgctttcttaccagcttgcctat
ttaaaagcccattacccgctttatttctacgcggcgctgttaacgagcgtgatcggcgac
gaggaaaaagtggctttatatgtttatgaagcaaggcaaaagcggatcgaattgctgccg
ccttccgtgaatcaaagccgctattctttttcggttgagcagggaaagatccgctacagt
ctggctgcggttaaacacgttggagcagcggcggtgaaagcgattgtgcaagagcggaaa
aaagggcctttctccgacttttttgatttttgtgtccgcttatttggaaagggaatcaac
cgaaaaacgatcgaatctttggttttatccggatgctttgatgaatttggcgtcgaaaga
gcggcgctgttggcgagcatagatgtcgctttagagcatgcgcagcttgtcggcccgtat
gtcgaagagggaatgttttccgatatatcgctgaagccgaaatatgttgaagctcccgcc
ttttcgctggaagaaaagttaatgcatgaaaaagaactgctcggtgtttatgtttctccg
catccaacatctgcccaccggaaaatgtttcgtttggcgggagcgcggccggtgatgagc
ataataagagaaaaagcggaccgccttgttaaagccggagtgtatattgcgcaagagaga
aagacccgcacgaaaaaaggcgaggaaatgtcatttttgacgataagcgatgaaagcggg
gaaatggacgcggttgcgtttcctgatgtatatcgccgttatgcttctgttttaaaaaaa
ggggaagtgcaattattggaaggaaaagtagagattcgtgcgggaaagccgcaattcgtc
attcgcaaagtgttggctccagcgctcgccgcggcgctttacgtaaaaattgatccggag
cagatcgccgctggaacattgtttgcgttaaaagagctgttgcaaaagcatcacggaaac
aatcctgtgtttttatattacgaacaagaacaaaagatggtgaagctttcggaagagtat
aatgtggaattaacggatgagtgcatcgccgcgttgaaggcgctgctaggcgatgatcat
attgtagtaaaatga
DBGET
integrated database retrieval system