Glycine max (soybean): 100790051
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Entry
100790051 CDS
T01710
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100790051
03015 mRNA surveillance pathway
100790051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100790051
03041 Spliceosome [BR:
gmx03041
]
100790051
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100790051
Spliceosome [BR:
gmx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100790051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
100790051
NCBI-ProteinID:
XP_003539073
UniProt:
I1LJY4
LinkDB
All DBs
Position
11:complement(10310980..10317251)
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AA seq
916 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVIKPWITRRVTELL
GFEDEVLINFIHGLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWMLLLSAQKNASGVPQ
QFLDAKEEELLKKKAESDLIASEIQRKTDNEDREIMEERLKKLDGGFDSKDNDTASDPTL
KLRDSGYREWDGKETDKRNGVRARSRLSRSPHSPAVSISPHRGSPSRSMSKSFSNSRSYS
GGRHRSRSISRSPEAQGPSLSAERIRRSPRRRSISPQRHSPRRSPHRRIPYSRRSRSPSP
ERRRMHSPVHRRSPSFRRRRSPSPVRRHRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSP
VRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPGRRHRSPSPGRCHRSPSPLGQRRS
LSPRRRRSLVTRHRSPSPVRRIPPTNVQNRSDSPMQSPSHIRQRYGSRTPSLSPSPLQRR
SPIPSKQRSPNISPQRSPQDEQSSQSPIRCVSPSPIRKNSPRHQKSPLHSSMGRVRTESV
TRQPSSPLGSAIRDKCGKASHYKSQDSMSTPEKSPIQSVSQEARSETSSEGRSPHESPMK
QRRDKLSNEINTNPLKKQRTQRPSRDSPDTRDEAEETHYSRESRDPKMNSSQKISKHFPV
SKRKGSPAKYRHEEFSPERVSGHPASEHHYDNNDWSKKGQEIMRDKSSGKGNEFPAQKSS
MNKETFSREKPQESYAVDIKKSDVKDQSHSNYAKSSYRHHKSETTQDLVGKGDRVNHNAS
HDSVSEDSGKHRREGKDRKRHKRSEKKYTSSDEDYSDDSELEDRKEAKRRRKEEKKLQKE
EKRRRCEEKRRRREERRAEKLKMKSKTDDISGDEEAKRMDYHQSDSVVTPSEQKKLEIEL
RNKALESLKAKKGMNN
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggtttctttcgaggcacatcggcggatcaagacactcggttttcgaacaag
caagcgaagctgatgaaatcgcagaagtttgcaccggaactggagcatctggtggacatg
acgaaggtgaatatggaagtaattaagccttggatcaccagaagggtgactgagcttctt
gggtttgaagatgaagtgcttattaacttcatacacggtcttctggatgcgaaggaagtg
aatgggaaagaagttcaaatacaaattactggatttatggaaaaaaacactggaaagttc
atgaaagagctttggatgctgcttctcagtgcgcagaaaaatgcaagtggtgttcctcag
cagttcttggatgccaaggaagaagaactcctgaagaagaaggctgaaagtgatctgatt
gcaagtgaaattcagaggaaaacagataatgaagatagagagatcatggaagagaggctg
aagaaactggacggtggatttgattcgaaggataatgatactgcatcagatccaactttg
aagctcagggattcagggtaccgggagtgggatgggaaggaaactgacaagaggaatggt
gttagagcaaggagcaggctttctaggtctccacattcacctgcagtttccatttcacct
catcgaggctcaccttcaaggtcaatgagcaaatcattttcaaattctcgaagttattca
ggtggtagacacaggtcaaggagtatatctaggtctccagaggctcaaggtccctctctt
tctgctgaaaggattcgccgttctccacgacgacgatctatttctcctcaaaggcattcc
ccacgacgttctcctcataggaggataccttattcaagaagatctagatctccttctcct
gaacgacgcagaatgcattctccagtccatcgtagatcaccatcttttcgacgacgtaga
tcaccttctcctgttcgacgacatagatcgccttctcctgtgcgacgacgtagatcgcct
tctcctgtgcgacgacgtagatcgccttctcctgtgcgacgacgtagatcgccttctcct
gtgcgacgacgtagatcaccttctcctgtgcgacgacgtagatcaccttctccagtgcgt
cggcgtagatcaccttctccagtgcgccgacgtagatcaccttcccctgggcgtcgacac
agatcaccttctcctgggcgctgtcatagatcaccatcacctcttggacaacggaggtca
ctctcacctagacgacgaagatcacttgttactcggcataggtcaccttcaccagtacgc
cgaataccgccaaccaatgtgcagaatagatcagactcccccatgcaatccccctcccac
atacgacaaaggtatggtagtagaactccttcactctctccatctccattgcaacgtaga
tcacctattcctagtaagcaaagatctcccaatatctccccacagaggtctcctcaagat
gaacagagttctcaatctccaatacggtgtgtatctccatctccaattaggaaaaattct
ccaagacaccaaaaaagtcccttgcattcttctatggggagagtcagaacagaatccgtg
actcgtcaaccctctagtcctctggggtcggcaataagagataaatgtggcaaagcttca
cactataaatcacaagattcaatgtccacacctgagaagtctccaattcaatctgtatct
caagaagcaaggagtgagaccagcagtgaaggtcgaagtcctcatgagagccctatgaaa
caaagaagagataagttgtccaatgaaataaacacgaatcctctgaagaaacaaagaacc
caaagacctagccgtgacagcccagatacaagagatgaagcagaagaaacgcactattcc
agagaaagcagagatccaaaaatgaattcatcacaaaagatatcaaaacatttccctgtt
agtaagcgaaaaggttcacctgcaaaatatcgtcacgaggagttctctcctgaaagggtg
tcaggtcatccagcttctgaacatcattatgataacaatgattggagtaagaaaggccag
gagataatgcgtgataaatcttccggaaagggcaatgaatttcctgctcaaaagtcatca
atgaacaaagaaactttttccagggagaagcctcaagaatcttatgctgtagatattaaa
aaatcagatgtcaaggaccaatcccattcaaactatgccaaaagcagttatcggcatcac
aaatccgaaaccactcaagatttagttggaaaaggtgatcgtgtcaatcacaatgcttca
catgattctgtttctgaggatagtggtaagcatagacgggagggaaaggataggaaaagg
cataaaaggtctgagaaaaagtatacatcttctgatgaggattatagtgatgattctgag
ttagaggacaggaaagaggctaagaggaggagaaaagaggagaagaagctgcagaaggag
gagaagcgtcgaagatgtgaagagaagcgacgcagaagggaagaacggcgtgcggagaag
ctgaaaatgaagagtaaaacagatgatatttcaggtgatgaggaggctaaacgaatggat
tatcatcaaagtgatagtgtagttacaccatctgagcaaaagaagcttgagattgaattg
cggaacaaggctcttgaatccctcaaagcaaagaagggcatgaataactaa
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