Glycine max (soybean): 100795427
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Entry
100795427 CDS
T01710
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gmx
Glycine max (soybean)
Pathway
gmx04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
100795427
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmx04040
]
100795427
Ion channels [BR:
gmx04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
100795427
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
Ion_trans_2
Cupin_2
Motif
Other DBs
NCBI-GeneID:
100795427
NCBI-ProteinID:
XP_003534112
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Position
9:complement(40242348..40250866)
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AA seq
812 aa
AA seq
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MHIPTLQHIIPTTNRLAIQFQLSFKKFVFTIQIFTLTALSLNYQGSMANFENDKLLMLSD
TDAQPYDEPLDAKFRRTVTRTQSASISISMSSLESYDKETSLVGHTGPLQSKRKTPFMQM
SGPLYATTGTGNPLQKHIVSGNKAEERKTDNFATLRDTGSNYWNNDYDRKNEHLLRSGQL
GMCNDPYCTTCPTYFNASQQRNPKPSTRWDPKFHNALYGDAKSFVRKLLSFCYSYVPGVM
NPHAKVVQKWNKFLAIFCLIAIFVDPLFFFLLYVEKDNKCIVINWPLTTALVLFRCVTDF
VYFLNILLQFRLAYVSRESRVVGAGDLVDHPKRIALHYLKGYFLIDLFVVFPLPQIMILF
VLPNSLEGANYAKNLLRAAILVQYIPKLFRFLPLLIGQSPTGFIFESAWANFIINLLIFM
LASHVVGSCWYLFGLQRVNQCLRDACHSSNIPGCMKFIDCGRGHGKNQPSLRSDQWINNT
DAVACLDPSPDGFSYGIYENAVPLTIETNIVNKYVYSLFWGFQQISTLAGNLEPSYFVWE
VLFTMAIIGMGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPEDLRRRV
RQAERYNWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRLFALMDEPILDAICDRL
RQKTYIKGSKILSQGGLVEKMVFVVRGKLESIGEDGTRIPLSEGDSCGEELLTWYLEHSS
VSTDGRKVRLPGQRLVSNRTVRCLTNVESFSLSASDIEEVTILFTRFLRSPCVQGALRYE
SPYWRSLAATRIQVAWRYRKKRLSRVNSSPSD
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcacattccaacgctccaacatatcattccaacaaccaatagacttgcaatccaattc
caactttctttcaaaaaattcgtcttcacaatacagattttcactcttacagctctcagt
ttgaattatcaaggaagcatggctaattttgaaaatgacaagctgctgatgctctcagat
acagatgcacaaccatatgatgaacccttggatgctaaatttcgaaggacagtaaccagg
acacaaagtgcatcaatttctatttctatgagttccttggagtcatatgataaagaaact
agccttgtgggacatactggtccacttcagagcaagagaaaaacaccctttatgcagatg
agtggtccattatatgctaccactggaactggaaatcctctgcagaagcatattgtatct
ggaaacaaagcagaggagagaaagacagataattttgctactctccgtgacacaggttca
aattactggaataatgactatgatagaaaaaatgaacacttactaaggtctgggcaactg
ggaatgtgcaatgatccttattgtactacttgccctacctacttcaatgcttctcagcaa
agaaatccaaaaccttcgactagatgggatccaaagttccataatgctctttatggggat
gccaagagttttgtgagaaaacttctttctttctgctattcgtatgttcctggagttatg
aaccctcatgctaaagtcgtacaaaaatggaacaaatttttggccattttttgcttgatt
gctatttttgtggatccattatttttcttcttactctatgtggagaaggataataaatgt
attgttatcaactggcctttgacaacagcacttgttttatttagatgtgtgactgatttt
gtttatttccttaacattcttctccagtttaggttagcttatgtttctcgtgagtcgagg
gtggttggtgctggagatttggttgaccatccaaagaggattgctcttcattacctaaag
ggttatttccttattgacttatttgttgtatttcctcttcctcagataatgatattgttt
gtcctaccaaattccttggagggagcaaattatgccaagaatcttctccgtgcagcgatc
ttagtgcaatatatccccaagttattcaggtttctgccactgctaattggccaatctccc
acaggattcatatttgagtcagcctgggcaaatttcattataaaccttctcatttttatg
cttgctagtcatgttgttggctcttgctggtacctcttcggtcttcagagggttaaccag
tgtctgcgggatgcctgccatagttccaatatacctggatgcatgaagttcattgattgt
ggacgtggccatggaaagaatcagcctagcttaagatcagatcagtggatcaacaatacc
gatgccgttgcttgtttggatccctctcctgatggtttctcttacgggatttatgagaat
gctgtaccacttactatagaaactaacattgtcaataaatatgtgtattctcttttttgg
ggattccagcaaatcagtactctagctggtaatctagaacctagctattttgtgtgggaa
gtcctttttactatggccatcataggaatgggactcttgctttttgcaattcttattgga
aacatacagaactttctacaggctcttgggcggaggaagctggaaatgcaacttagaggc
cgggatgttgagcaatggatgagccatcggcgcttaccagaagatctaagaaggagagta
agacaggctgaacggtataattgggctgcaacaaggggggtgaatgaagaaatgcttatg
gagaatttgccagaagatcttcagagagacataagacgtcatctcttcaaatttgttaag
aaaattcggctttttgctctgatggatgaacctatcttagatgccatttgtgatagacta
agacaaaagacatacatcaaaggaagtaaaattctaagtcagggtggtctagtagagaag
atggtattcgtggtgcgtggcaaattggaaagcattggagaagatggaactagaattcct
ctatctgaaggggattcttgtggtgaagaacttctgacatggtatcttgagcattcttca
gtcagcacagatggtagaaaagtaaggcttccaggacagagattggttagcaacaggaca
gtaaggtgcttaacaaatgtggagtcattttcactctctgcttcggacattgaagaagtc
acaatccttttcacaagattcttgcggagtccatgcgttcaaggagctctaaggtatgag
tcaccttattggagatcccttgctgcgacccgcattcaagttgcatggagatacaggaag
aaacgtctaagtcgtgttaattcctcaccatcagattaa
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