Gluconobacter oxydans 621H: GOX1263
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Entry
GOX1263 CDS
T00230
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gox
Gluconobacter oxydans 621H
Brite
KEGG Orthology (KO) [BR:
gox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gox03032
]
GOX1263
03400 DNA repair and recombination proteins [BR:
gox03400
]
GOX1263
Enzymes [BR:
gox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GOX1263
DNA replication proteins [BR:
gox03032
]
Prokaryotic type
DNA Topoisomerases
GOX1263
DNA repair and recombination proteins [BR:
gox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GOX1263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
Motif
Other DBs
NCBI-ProteinID:
AAW61024
UniProt:
Q5FRH2
LinkDB
All DBs
Position
complement(1377636..1380332)
Genome browser
AA seq
898 aa
AA seq
DB search
MTDVVVVESPAKAKTINKYLGSGYTVLASFGHVRDLPPKDGSVRPDENFAMSWQTDERGA
KQISAITKALKGAKNLYLATDPDREGEAISWHVRSVLEEKKLLKNVDVHRVTFNEITKSA
VTAAMAAPRELDRPLIDAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLICE
REAEIEVFRPKEYWTVTGGFTTPGKAAFQARLTHLKSEKLDQFDLNNEQLAFGARDTVLG
GQFTVRSVERKRTKRNPPPPFTTSTLQQEASRKLGMSAQTTMRTAQQLYEGVDLRGETTG
LITYMRTDGVTMAKEAIGSIRGHIGKAFGDEYVPDYPRSYSTKAKNAQEAHEAIRPTDVF
LTPQQVAHALTPEQKKLYELIWKRSVASQMQSAELDQVAVTLADASGQTLLRATGSTIAF
DGFLKLYIEGRDDTKAEDEDGKLLPPMKEGDRLTTGAVEAEQHFTQPPPRYSEASLVKKM
EEIGIGRPSTYASILGVLRDRNYVRLDARRFVPEDRGRLVTAFLTSFFERYVDTGFTASL
EEQLDDISGGRADWHDVMAAFWHDFSAAVAQTKDLKISDVIDALDEDLGPHFFPPRPDGA
DPRVCTSCGTGRLGLRLGKFGAFIGCSNYPTCQFTRRLVAEEGDTEGLNDGPKVLGQDPE
TGEDVTIRRGPYGLYIQRGEPNPEDKKAKPKRTTIPKGLDGNTMTLEQALGLLSLPRLVG
LHPETGEKIEAGLGRFGPYVKMGAIYGTLDKDDDVLTVGLNRAVDALAKKLASIRNLGPH
PKDGEPVMIRKGRFGPYAQHGQLIANLPKGQDMDEVTLDEAVALLAEKGKPLKGGAKKTS
AKKAAPKAAKAKKNVAAAEGDETAPKKVTKRSPAKSATKTKTTTPRKRKTVSDTSSEG
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgttgtggtggtcgagagcccggcaaaggccaagacgatcaacaagtatctg
ggaagcggatataccgtgctcgcttcgttcggccatgtgcgggatctgccgcccaaggac
ggcagcgtgcgcccggacgagaactttgccatgagctggcagacggacgagcgcggtgcc
aagcagatttccgccatcaccaaggcgctgaagggggcgaagaacctttacctcgccact
gacccggatcgcgaaggcgaagcgatttcctggcatgtccgcagcgttctggaagaaaag
aagcttctgaagaacgtcgacgtccatcgcgtcaccttcaacgaaatcaccaaatcagcc
gtcacggctgcgatggccgctccgcgtgagctggaccgtccgctgatcgacgcctacctg
gcccggcgcgcgctggattatctggtgggcttcacgctgtctcccgtcctgtggcgcaag
ctgccgggcagccggagtgccgggcgtgtgcagtccgttgctctccgcctgatctgtgag
cgcgaagccgaaatcgaggtgttccgccccaaggaatactggaccgtcaccggcggcttc
acgacgccgggcaaagcggcatttcaggcacggctgacgcatctgaagagcgagaagctc
gaccagtttgacctgaacaacgagcagctggctttcggcgcgcgcgataccgttctgggt
ggacagttcacggtccgctccgtcgagcgcaagcgcaccaagcgcaacccgccgccgccg
ttcacgacgtccaccctgcagcaggaagcctcacgcaagctcggcatgagcgcgcagacc
acgatgcggacggcccagcagctttatgaaggtgtggatctgcgtggcgagaccaccggt
ctgatcacctatatgcgaaccgatggcgtgacgatggccaaggaagccatcgggtccatc
cgcgggcatatcggcaaggcgttcggagacgagtatgtgccggattatccgcgcagctat
tcgaccaaggccaagaatgcgcaggaggcccatgaggccatccgcccgacggacgtcttc
ctgacaccgcagcaggtcgcccatgccctgacgccggaacagaagaagctttacgaactg
atctggaagcgttccgtcgcctcgcagatgcagtcagccgaactggatcaggtggcagta
acgctggcggacgcgagcggccagacgcttctgcgcgccacgggttcgaccatcgcgttc
gacggcttcctcaagctctatatcgaaggccgtgacgacacgaaggccgaggacgaggac
ggcaagcttctgccccccatgaaggaaggcgatcgcctgacgacgggggctgtggaagcc
gaacagcacttcacccagccgccgccgcgctattcggaagcctcgctcgtcaagaaaatg
gaagagatcggcattggccgtccctcgacttatgcgtccattctcggcgtgctgcgggac
cgcaactatgtgcgtctggacgcacggcgtttcgttcccgaagatcgcggccgtctggtc
acggcgtttctgacgtcgttcttcgagcggtatgtcgatacgggcttcacggcctcgctt
gaagagcagctcgatgacatttcaggcggccgggccgattggcatgatgtcatggccgcg
ttctggcatgatttctcggctgccgtggcacagaccaaggatctgaagatctcggacgtc
atcgacgcgctggacgaggatcttggaccgcatttcttcccgccacgtcccgatggcgcc
gatccgcgtgtctgcacatcctgcggaaccggacgactgggtctgcggctgggcaagttc
ggcgccttcatcggctgttcgaactacccgacctgccagttcacccgccgtctggtggcc
gaggaaggcgataccgaagggctgaatgatggcccgaaggttctggggcaggatccggag
accggcgaggacgtcacgatccgccgcgggccttacggtctgtatatccagcgcggagag
ccgaaccccgaagacaagaaggccaagcccaagcggacgaccatccccaagggtctcgac
ggcaataccatgacgctggaacaggcgctgggtctgctgtccctgccgcgtctggtcgga
cttcaccctgaaacaggcgagaagatcgaggccggtctggggcgcttcggaccctatgtg
aagatgggcgccatctatggcacgctcgacaaggatgatgacgtcctgactgtcgggctg
aaccgtgccgtggatgcgctggccaagaaactggcctccatccgcaatctggggccgcac
ccgaaagacggcgaaccggtcatgatccgcaagggacggtttggcccgtacgcgcagcat
ggccagctgattgccaacctgccgaaggggcaggatatggatgaggtcacgctggatgag
gccgtggcgcttctggcggagaagggcaagccactgaaaggtggcgcaaaaaaaacttcc
gcgaaaaaagcggctccgaaagcagcaaaggcgaaaaaaaacgttgcggctgcggaaggg
gatgagacggccccgaagaaggtaacaaagcgtagcccggccaaatccgccacaaagacg
aaaaccacaacgccgcggaagcgtaagactgtttccgacacgtcgtcggaaggctga
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