Gordonibacter pamelaeae: GPA_24920
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Entry
GPA_24920 CDS
T02609
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
gpa
Gordonibacter pamelaeae
Pathway
gpa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gpa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GPA_24920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gpa02000
]
GPA_24920
Transporters [BR:
gpa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
GPA_24920
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
VitK2_biosynth
SGIII
Motif
Other DBs
NCBI-ProteinID:
CBL04631
UniProt:
D6EA84
LinkDB
All DBs
Position
complement(2487847..2489499)
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AA seq
550 aa
AA seq
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MATLTRRDFAKLTGATAATLSLGGILAGCAGGGDEKPAAGADATGADVAAPSQVIVSMTV
GSEPAAGFDPLVSWGCGEHVHEPLIQSTLITTDTDLSFKSDLATSYEASEDGMTWTFKIR
DDVKFTDGTPLTARDVAFTINGILNSEASECDMSMVREAVAEDDATVVIHMEKPFNALLY
TLAVVGIVPEHAYGEGYGANPVGSGRYMLEQWDKGQQVILKANPDYYGEAPKIERVVAVF
MEEDASLAAAQSGQVDVAYTSATFAAQQPAGYDLLNCASVDSRGISLPTISAGAKKTDEK
GEAAAGNDVTCDVAVRQAINYGVDRERMIDNVMNGFGTVAYSVGDGMPWSSPDMKCTTDV
ERAKKLLDDAGWAPGADGIREKDGVRASMNLYYSAGDTVRQGIAEEFSNQMKELGLEFAI
KGVSWDDLYPHQFTDPVVWGWGTNAPIETYNLFYSKGTGNYACYENAATDAYLDEALACP
KVEDSFDLWKKAQWDGTTGIAPQGDAPWVWFANIDHLYFAKENLKVAEQKPHPHGHGWSL
VNNVDQWSWA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcaacactcacacggcgcgacttcgcgaagctgacgggggctacggcagccacgctt
tcgctgggcgggatcttggcgggctgcgcgggcggcggcgatgagaagccggcggcaggc
gcagatgcgacgggcgcggacgtggcggccccctcgcaggtgatcgtgtccatgaccgtc
ggctccgagccggcggcgggcttcgacccgctggtgtcctggggctgcggcgagcacgtg
cacgagccgctcattcagtcgacgctcatcaccacggacaccgaccttagcttcaagagc
gaccttgccacgtcctacgaggcctccgaagacggcatgacctggacgttcaagatccgc
gacgatgtgaagttcaccgatggcacgccgctcacggcgcgcgacgtggccttcaccatc
aacggcatcctgaactccgaggcttccgagtgcgatatgtccatggtgagggaagccgtg
gcggaagacgacgccaccgtggtcatccacatggagaagccgttcaacgcgctgctctac
acgctggccgtggtgggcatcgtgcccgagcacgcctacggcgagggctacggcgccaac
cccgtcggcagcggccgctatatgcttgagcagtgggacaagggccagcaggtcatcctc
aaggccaaccccgactactacggggaggcgccgaagatcgagcgcgtggtggccgtgttc
atggaggaggacgcctcgctcgccgcggcgcagtccggccaggttgacgtggcctacacc
tccgcgacgttcgccgcgcagcagccggccggctacgacctgctgaactgcgcgtcggtg
gactcgcgcggcatctcgctgcccaccatctccgccggtgcgaagaagaccgacgagaag
ggcgaggcggccgctggcaacgacgtgacgtgcgatgtggccgtgcgccaggccatcaac
tacggcgtggaccgcgagcgtatgatcgacaacgtgatgaacggcttcggcaccgtggcc
tacagcgtgggcgacggcatgccgtggtcctcgcccgacatgaagtgcacgaccgacgtg
gagcgggcgaagaagctgctcgacgatgccggctgggcgccgggcgccgacggcatccgc
gagaaggacggcgtgcgcgcctcgatgaacctgtactactcggccggcgacaccgtgcgc
cagggtatcgccgaggagttctccaaccagatgaaggaactggggcttgagttcgccata
aagggcgtgagctgggacgacctctacccgcaccagttcaccgatccggtggtgtggggt
tggggcaccaacgcccccatcgagacgtacaacctgttctactccaagggcacgggcaac
tacgcctgctacgagaacgccgccaccgacgcgtacctggacgaggcgctggcctgcccc
aaggtggaggactcgttcgacttgtggaagaaggcccagtgggatggcacgaccggcatc
gcgccgcagggcgacgcgccctgggtgtggttcgcgaacatcgaccatctgtactttgcg
aaggagaacctgaaggtcgccgagcagaagccgcatccgcacggccacggctggtcgctc
gtgaacaacgtcgaccagtggtcgtgggcgtaa
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