Gordonibacter pamelaeae: GPA_30580
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Entry
GPA_30580 CDS
T02609
Name
(GenBank) diguanylate cyclase (GGDEF) domain
Organism
gpa
Gordonibacter pamelaeae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
HD_5
Response_reg
HD
cREC_REC
Se-cys_synth_N
Motif
Other DBs
NCBI-ProteinID:
CBL04950
UniProt:
D6EB53
LinkDB
All DBs
Position
complement(3083353..3085446)
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AA seq
697 aa
AA seq
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MRKRSQILIVDDSELNRSMLADILYKEYDVLEAENGREAIAMLQEHEHEISLMLLDIVMP
EMDGFEVLAVMGKNKWLESIPVIIISAESASTYIDSAYDLGATEYISRPFDPKAVQRRVG
NTVLLYSKQKMLENMVTNQMLDKEKSNLIMVEVLSHIVEFRNGESGMHVLNIRSITKMLL
AQLCRISDQYSAIQPRIPLIANASALHDIGKISISESILNKPGKLTPEEWLIMKTHSEAG
ANILESTRYYPHEELVSVARDICRWHHERYDGKGYPDGLVGDDIPIEAQVVALADVYDAL
THKRVYKEALPHEVSMRMIFDGECGAFNPLLLQCLADIGPQLEKELKLKSLGHASKDEMI
DATRSMMQSGNVSNRTLALLEQERIKYQFFADLSREIQFEYTAHTDTLMLSEWGASQLGL
PSFIENPNGNPELLRVMVRRDMESLRNLILSASPKDPKVSGHYLLNVNGTRRWHKFLARP
LWLGNDADIFTGFIGKCIDVHDERLKMDRLIEQANTDALTGLYHRKAARKVVQEALDEAE
SGMCFTLMLFDLDFFKHANDHYGHLFGDELLQETARRMLGAVRDVDITARIGGDEFLIFI
ESPLDSTPAVERIFSSLRCTCKGHPITVSMGVARAPQDGMQFDELFHCADRALYAAKQRG
RNCYCLYDDSMAGQLSVLSEIPSEEAGEQSPDQACGQ
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcgcagccagatcctcatcgtggacgactccgagctgaaccgctccatgctg
gcggacatcctctacaaggaatacgacgtcttggaagccgagaacggacgcgaagccatc
gcgatgctccaagagcacgagcacgagatatccctcatgctgctggacatcgtcatgccc
gagatggacggcttcgaagtgctggccgtcatgggcaagaacaaatggctcgagagcatc
cccgtcatcatcatctcggccgaaagcgcctccacctacatcgacagcgcctacgacctg
ggcgccaccgagtacatcagccggcccttcgaccccaaggcggtgcagcgccgcgtgggc
aacaccgtcttgctgtactccaagcagaagatgctcgagaacatggtgaccaaccagatg
ctcgacaaggaaaagagcaacctgatcatggtggaggtgctcagccacatcgtggagttc
cgcaacggggagagcggaatgcacgtgctgaacatccgctccatcacgaagatgctgctc
gcccagctctgccgcatctccgaccagtacagcgccatccagccccggatccccctcatc
gccaacgcctcggcgctgcacgacatcggcaagatatccatcagtgagagcattttgaac
aagcccggcaagctcacgccggaagagtggctcatcatgaagacccacagcgaggccggc
gcgaacatcctggagagcacccgctactacccgcacgaggagctggtcagcgtagcgcgc
gacatctgccgctggcaccacgagcgctacgacggcaagggctaccccgacggcctcgtc
ggcgatgacattcccatcgaggcgcaggtggtggcgctcgccgacgtgtacgatgccctg
acgcacaagcgcgtgtacaaggaggccttgccgcacgaggtgtccatgcgcatgatattc
gacggcgagtgcggcgcgttcaacccgctcctcctccagtgcctggccgacataggcccc
cagctggaaaaggagctcaagctgaagtcgctgggccacgcctcgaaagacgagatgatc
gacgccacccgctccatgatgcagtccggcaacgtgtccaaccgcacgctggcgcttctg
gagcaggagcgcatcaagtaccagttcttcgccgacttgtcgcgggagatccagttcgag
tacaccgcgcacaccgacaccctcatgctctcggaatggggtgcctcgcagctcggcctg
cccagcttcatcgagaacccgaacgggaacccggagctgctgcgggtcatggtgcgccgc
gatatggagagcctgcgcaacctcatactctcggcatccccgaaggatccgaaggtgagc
gggcattacctgctgaacgtgaacggcacccgccgctggcacaagttcctggcccgcccc
ctttggctgggcaacgacgccgatatcttcaccgggttcatcgggaaatgcatcgacgtc
cacgacgagcgtttgaagatggatcggctcatagagcaggcgaacaccgatgcgctcacg
gggctgtaccatcgcaaagccgcccgaaaggtcgtgcaggaggccttggacgaggccgag
tccggcatgtgcttcacgctcatgctcttcgacctcgacttcttcaagcatgcgaacgat
cactacgggcacctgttcggcgacgagcttttgcaggagacggcccggcgcatgctcggc
gcggtgcgcgacgtggacatcaccgcccgcatcggcggcgacgagttcctcatcttcatc
gaatcgccccttgactccaccccggccgtcgagcgcatcttcagctctttgcggtgcacg
tgcaagggacaccccatcaccgtcagcatgggcgttgcccgcgcaccgcaggacggcatg
cagttcgacgagctgttccactgcgcggaccgggcgctgtacgccgccaagcagcggggc
cgcaactgctactgcctgtacgacgactccatggccggccagctgtcggtgctctccgag
atacccagcgaggaagccggggagcaatcgcccgaccaggcgtgcggccagtga
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