Gordonibacter pamelaeae: GPA_30660
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Entry
GPA_30660 CDS
T02609
Name
(GenBank) diguanylate cyclase (GGDEF) domain
Organism
gpa
Gordonibacter pamelaeae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
Response_reg
Motif
Other DBs
NCBI-ProteinID:
CBL04956
UniProt:
D6EB59
LinkDB
All DBs
Position
complement(3098647..3100338)
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AA seq
563 aa
AA seq
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MNGGKGMQADKKILAVEADEDCRTSLLPALSSRYTVLEAEDGDQALKLLEDQGGDFALVL
ANATRTSPDGQPFPERLKTDPRFASLPVVAISPEAGEEEEMAALSHGADGFIPKPCRTEL
ALCRVAAVMRLCESVALAKQARYDDIADVYSKSYFYQRVRDILVRNPATSYDILCSDIED
FKLINDTIGIVAGDRLLRQVGKLHASLLGDHGICGRLSADRFACLIEHREDYSDEMFTQS
TARIKSGFGNRNVVLKYGIYRVEDREVPVEQMCDRALLAVQSIKGQYGKHFAFYDDKLRD
TLLHRQAITDGMERALASGQFEVYLQPKFRIADGSLSGAEALVRWNHPEWGLQPPSEFIP
LFERNGFITRLDQYVWEQACSLMRRWDLMGFPHIDVSVNVSRTDIRDMDMARVLGGLVER
YGLDPSRLHLEITESACKDSADQLVETLHRLRKMGFVIEMDDFGSGYSSLNMLTEMPLDV
LKLDMKFIQTEVANPSGDSILGFIVSLARWMELSVVAEGVETREQLERLQADGCDYAQGY
FLARPMPVKALEELLASPPGCER
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggtaagggtatgcaggcggacaagaagattctggcagtcgaggccgacgag
gactgccgaacaagcctcctcccggccctgtcctcgcgctacacggtcttggaggcggag
gatggcgaccaggctttgaagctcctggaggaccaaggcggcgacttcgccctcgtcctt
gccaacgcaacgcgcacgtcgcccgatgggcaacctttccccgagcgcctcaagaccgac
ccgcgcttcgcctccctgcccgtcgtcgcgatctcgcccgaagctggcgaggaagaggag
atggcggccctctcccatggcgccgacggcttcatccccaaaccgtgccgcaccgagctg
gcgctctgccgcgtggcggccgtcatgcgcctgtgcgagtccgtcgccctggccaagcag
gcgcgctacgacgacatcgccgacgtctacagcaaaagctacttctaccagcgggttcgc
gacatcctcgtgcgcaaccccgccacgagctacgacatcctctgctccgacatcgaggac
ttcaagctgatcaacgacaccatcggcattgtcgccggcgaccggttgctgcggcaggtg
ggaaagctgcacgccagcctgctgggagaccacggcatctgcggacggctcagcgccgac
cggttcgcgtgcctgatcgagcatcgcgaggactactcggacgagatgttcacccagagc
accgcgcgcatcaaaagcggctttggcaaccgcaacgtggtgctgaagtacggcatctac
cgggtcgaggaccgcgaggtgccggtggagcagatgtgcgaccgtgcgcttttggccgtg
cagagcatcaagggtcagtacgggaagcacttcgccttctacgacgacaagctccgggac
acgctgctgcatcgccaggccatcacggacggcatggagcgcgccctggcctccggacag
ttcgaggtctacctgcagcccaagttccgcatcgccgacggcagcctctccggggccgag
gcgctcgtccgctggaaccatccggaatgggggctccagccgccgtcggagttcatcccc
cttttcgagcgcaacggcttcatcacgaggctcgaccagtacgtgtgggaacaggcctgc
tcgctgatgcggcggtgggacctcatgggctttccccacatcgacgtgtcggtcaacgtc
tcgcgcaccgacatccgcgacatggacatggcgcgcgtcctgggcggcttggtcgagcgc
tacggcctcgacccttcccggctccacctcgagatcacggagagcgcctgcaaggactcc
gcggaccagctcgtcgaaaccctgcaccgcctccggaaaatgggcttcgtcatagagatg
gacgacttcggcagcggctactcttcgctgaacatgctcaccgaaatgccgctcgacgtg
ctgaagctcgacatgaaattcatccagaccgaggtcgcgaacccctcgggcgacagcatc
ctgggcttcatcgtgagcctggcgcgctggatggagctcagcgtggtggcggagggagtg
gagacccgggagcagctggagcgcctgcaggccgacgggtgcgattacgcccaagggtac
ttcctggccaggcccatgcccgtgaaggcgctcgaggagctgctggcctccccgccgggg
tgcgagcgatga
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