Paraglaciecola psychrophila: C427_4064
Help
Entry
C427_4064 CDS
T02535
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C427_4064 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gps01007
]
C427_4064 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gps03016
]
C427_4064 (aspS)
03029 Mitochondrial biogenesis [BR:
gps03029
]
C427_4064 (aspS)
Enzymes [BR:
gps01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
C427_4064 (aspS)
Amino acid related enzymes [BR:
gps01007
]
Aminoacyl-tRNA synthetase
Class II (A)
C427_4064 (aspS)
Transfer RNA biogenesis [BR:
gps03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
C427_4064 (aspS)
Prokaryotic type
Other AARSs
C427_4064 (aspS)
Mitochondrial biogenesis [BR:
gps03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
C427_4064 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AGH46169
UniProt:
K6ZZS1
LinkDB
All DBs
Position
complement(3903356..3905122)
Genome browser
AA seq
588 aa
AA seq
DB search
MRTDYCGNINSSYIGQTVTLCGWVNRSRDLGGVIFLDLRDREGVVQVVFDPDLVEVFNTA
NSLRNEFCVQLSGEVRARPSGQVNKDMSTGEIEMLGKSLTILNKAAPLPLDWNQENSEEQ
RLKYRYLDLRRPLMSDRLKFRAKVTSTVRSYLENDGFLDIETPILTKATPEGARDYLVPS
RTHKGQFFALPQSPQLFKQLLMMSGMDKYYQIVKCFRDEDLRADRQPEFTQIDIETTFLD
AGGVMAITEGLIRNLFQKMLSVDLGDFPSMTYADAMRRYGSDKPDLRNPLELTDIADLLK
DVEFKVFSGPANDAKGRVAVIRVPGGAKLSRKQIDDYGKFVGIYGAKGLAWMKVNDIDAG
MEGLQSPILKFLTEDVAKGILERSGAQSGDILLFGADNNTVVTEALGALRLKLGEDLDLL
EGKWKPLWVVDFPMFEEFDGQFHALHHPFTAPRDMTPDELAANPAGALSNAYDMVLNGCE
LGGGSVRIHQQDMQAKVFSLLGISDEEAEVKFGFLLEALKFGAPPHAGLAFGLDRLVMLM
TGATSIRDVMAFPKTNTAACPLTNAPGEANPEQLKELSIQTVIEKKTD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacggactattgtggcaacatcaattcatcttatatcggacaaaccgtcactctg
tgtggctgggttaatcgaagtcgcgatttaggtggggttatttttctcgacctacgtgac
cgagaaggtgtggtgcaggtggtgtttgaccctgatttagtcgaagtctttaatactgca
aatagtttacggaatgaattttgtgtgcagttaagtggtgaagtgcgcgccaggccatca
ggccaagtcaacaaagatatgtctactggcgaaattgaaatgcttggtaagtctttgact
atactaaacaaagcagctccgttaccgctagattggaatcaagaaaattccgaagagcag
cggttaaaataccgttatttagacttacgacgtccattaatgagtgatcgtttaaaattt
agagccaaagtgaccagcacagtgcgcagttatcttgaaaacgatggtttcttagatatc
gaaacgcctattctgaccaaagcgacacccgaaggtgctcgtgattatttggtgccaagc
cgcacccataaaggtcagttttttgctttgccacagtcaccacaattgtttaaacagtta
ttgatgatgtcgggcatggataaatattatcaaatcgtaaaatgtttccgagacgaagat
ttacgagccgatcgccaacctgaatttacccagattgatattgaaactaccttcttagat
gctggtggtgtgatggcgatcactgaaggtctaatacgtaatttatttcaaaaaatgttg
tcggtagatttaggtgacttcccaagcatgacttacgccgatgccatgcgtcgttacggt
agcgacaaacctgatttacgtaacccattagaattgacagatatagcggatttactaaaa
gacgttgaatttaaagtgttctctggcccagccaatgacgctaaaggacgtgttgccgtt
atccgcgtgccgggcggtgctaagttatctcgcaagcagattgacgactacggtaaattt
gtgggtatttacggtgctaagggtttggcatggatgaaagtcaacgacattgatgctgga
atggaaggattgcaatcacctatccttaagtttttaacggaagacgtggccaaaggtatt
ttagaacgcagtggcgcacaaagtggcgacattcttttgttcggtgctgacaacaacacc
gtggtgacagaagcattaggagccctcagactaaaattaggcgaagatttagatttgtta
gaaggaaagtggaaacctctttgggtagtcgactttcctatgtttgaagaatttgatggc
cagttccatgcattgcatcatccgtttacagcacccagagatatgaccccagatgaatta
gcggctaaccctgcaggtgctttgtcaaatgcttacgacatggtcttaaacggttgtgag
ttaggtggcggctcggtacgtattcatcaacaagatatgcaagccaaagtgttttcattg
ttaggtatcagtgatgaagaagccgaagtgaaatttggtttcttacttgaagcattgaag
tttggtgcgccgcctcatgccggtttagcttttggtttagaccgtttggtgatgctgatg
acaggtgcaacgtcgattcgtgatgtgatggcgtttcctaaaactaacactgctgcctgt
cctttgaccaacgcaccgggtgaagccaacccagagcaactcaaagagctgtcaattcaa
actgtaatagaaaagaaaactgactga
DBGET
integrated database retrieval system
