Gossypium raimondii: 105780788
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Entry
105780788 CDS
T04129
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gra
Gossypium raimondii
Pathway
gra00900
Terpenoid backbone biosynthesis
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Module
gra_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
105780788
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gra01006
]
105780788
Enzymes [BR:
gra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
105780788
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
105780788
2.5.1.29 geranylgeranyl diphosphate synthase
105780788
Prenyltransferases [BR:
gra01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
105780788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
105780788
NCBI-ProteinID:
XP_012460748
UniProt:
A0A0D2NK44
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All DBs
Position
1:complement(9286662..9287893)
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AA seq
296 aa
AA seq
DB search
MARALSHIHGNPIFHVPYTPIPTRQCPSNLPCRLFKVTMSSNQSYWTSINADIEAHLKQA
IPVREPLSVFEPMNHLTFSAPRSTAPALCVAACELVGGHRDQALPAASALQLMYAASFAH
EHLPLTQSCRPKSEIQHLYGPNIELLIGDAMIPFGLELLAVSNDSTQKNSDRVLRVMVEI
TRAIGSQGMVHGQYYEVEYESSCIRQNERASEKYEGTLHGCAAACGAILGGGSEVEIEKM
RRYGVYIGKIQGMIRRDERKSKDLKELVEETRKLATNELSGFNEAKVEAISKLFGA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggccagagctctctcccatatccatggcaacccaatattccatgttccttacacaccg
attcccacacgtcaatgtccttccaatttgccttgtaggcttttcaaagtcaccatgtcg
agtaaccaatcttattggacctccattaacgctgacattgaagctcatctcaagcaagcc
ataccggtacgagaacccctctctgttttcgaacccatgaaccatttgacgttttccgcc
ccacggagcactgctcctgcattatgcgtggccgcctgcgagcttgtcgggggtcaccgg
gaccaagctttgcccgcggcatcagcacttcagctcatgtatgcagcttccttcgctcac
gaacaccttcccttgacccaaagctgtaggcccaaatccgagatccaacatctctacggt
ccaaacattgagttactcatcggggacgcaatgataccattcgggctcgagctgttggcc
gtatcgaatgattcgactcaaaagaattcggatcgagtattacgtgtaatggtcgagatc
acacgtgctataggctcacagggcatggttcatggacaatattacgaagtagaatacgag
tcaagctgtatcagacaaaacgaacgtgctagtgaaaaatacgaaggcacattacacggt
tgcgcggccgcgtgtggcgcgatattaggaggcggaagtgaagtggagatagagaaaatg
agaaggtacggtgtatacataggaaaaatacaaggaatgataagaagagatgaaagaaaa
agcaaggatttgaaggaattggtggaggagactagaaagttagccaccaatgaattgagc
ggtttcaatgaggcaaaggttgaagcaatatctaagctatttggagcctag
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