KEGG   Gossypium raimondii: 105781746Help
Entry
105781746         CDS       T04129                                 

Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
gra  Gossypium raimondii
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:gra00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    105781746
Enzymes [BR:gra01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     105781746
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     105781746
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
13
AA seq 1180 aa AA seqDB search
MTEEIKLSVVVSLFTWIQRSRPSAKRSKFRKFLDTFCTPSDYFSAMRLILPSLDRERGTY
GLKESVLAICLIDALGMSRDSADALRLINWRKGGANTGANAGNFALVAAEVLQRRQGTVS
GGLTIKELNELLNRLASAESRAEKTAILATLINKTNAQEMKWVIMIILKDLKLGISEKSI
FQEFHPDAEDLFNVTCDLKLVCEKLRDRTQRHKRQDIEVGKAVRPQLALRVRDPAAAWKK
LHGKEVVVECKFDGDRIQIHKNGTDIHYYSRNFLDHSEYQHGMSNIITQNILVDRCILDG
EMLVWDSTLNQFAEFGSNQEIAKAAKDGLDSDRQLCYVAFDILYVGDTSVIHQSLKERHE
LLQKVVKPLKGRLEILVPNGGLNAHRPPGEPCWSCIAHSVNDVERFFKETIENRDEGIVI
KDLNSKWEPGDRNGKWLKLKPDYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLADRPD
PNAYPRRFISFCRVGTGLTDDDLETVAKKLKPYFRKYEYPKKMQPSFYQVTNHSKERPDV
WIESPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDRVRYDKPWHECLGVQSFVELVHS
SNGTTQKGTEQENQPDSKTKHKAHARKADKKNVSIVPSHFIRTDTSSVKGETLIFSNLMF
YFVNVPPTYSLDSFHKMVVEHGGRFSMNLNNSVTHCVAAESKGIKYQAAKLHGDIIHYSW
ALDCCSQKKLIPLQPKYFLFLSESSKMKLQQEVDQYFDPYYWDLDLVDVKRLLNNIQRSE
NSKTIDYYRAKYCPNDKWSLFHGCSVYFYSSAESLKADWQVLLNLALRRLKHEILMGGGK
ISENLSNATHLVVLSVPGLDVDFDSFIKSCSFEEKNLVWKKGLHVVRSQWLENCLEQGQK
LREDQYSLKPNDFEETNFVESKLDQNLEKSKPDFNGVQNKGTCTSPESKTKQRGGKDHPE
KSISSVTPSHGNRKRRPASKNTKKGKTVVTRAQRVPRRRGKMSVKINEDGSEESGSDDKT
NEEIKKGEGYNTECYRMAGRENFEFHQNQAAEENASINWPKKAHDTVMCETNNDQPGNKA
EKFDHMELDEGNYGHEISNSEKLEVMVDPVRAMLLDMIPSLGIKHVKTTNSVVQNEKPHM
DNDADIRVVEDEKLDADFIPQPQKKKKVSYKDVAGELLKD
NT seq 3543 nt NT seq  +upstreamnt  +downstreamnt
atgacggaagaaataaagttaagcgttgtagtgagtttattcacatggatccagaggagc
cgaccgtcggcgaagcggtctaagtttcgtaaattcctcgatacgttttgtacaccttcc
gattacttcagtgctatgcggcttatccttccttcactcgatcgagaacgtggaacttac
ggcctcaaggagtctgttctcgcaatttgcctcatcgatgctctcggcatgtcgagggat
tctgctgatgctctacgtcttatcaattggcgcaaaggtggagctaatactggtgctaat
gctggaaactttgctcttgttgctgctgaggttttgcagcgtaggcaaggtacggtttcc
gggggacttactatcaaggagttgaatgagttgcttaatcgattggcttctgctgaaagc
agggctgagaagactgcaatccttgctactttgattaataagacaaatgcacaggaaatg
aagtgggttatcatgattattctaaaagatctcaagttgggaattagtgagaagagcata
tttcaggaatttcatccagatgccgaagacttgtttaatgtcacgtgtgacctaaaattg
gtttgtgaaaagttaagggatcgtactcagcgtcataagcgtcaggacattgaggttgga
aaggctgtacgcccacaactagctttgagagttcgtgatccagctgctgcatggaaaaag
cttcatggtaaggaggtagttgttgagtgtaaatttgatggtgatcgcatccaaatccac
aaaaatggaacagacatacactactactccaggaattttcttgatcattctgaatatcag
cacgggatgtcaaatattattacacaaaatattttggttgataggtgtatacttgatgga
gaaatgttagtttgggattccactttaaatcagtttgctgagttcgggtcaaatcaggaa
atagccaaggcagcaaaagatggccttgatagtgacagacagttatgttatgttgcattt
gacattctttatgttggggatacaagtgttattcaccaaagtttgaaggaacggcatgag
cttcttcaaaaagttgtgaagcctttgaagggtcgtttagagattttagtgcctaatggt
ggtctcaatgcacatcgtcctcctggggaaccttgttggtcatgtattgctcacagtgtg
aatgatgttgagagatttttcaaggaaacaattgaaaatagggatgaaggaattgtaatt
aaagaccttaattccaagtgggaaccaggtgatagaaatgggaagtggttgaagttgaag
cctgattacattcgggctggttctgacttggatgttctcattattggagggtattacggc
tctgggcgtcgaggaggagaggtagctcaattcttagtaggcctagcagatcgtccagac
cccaatgcctatcccaggcgatttatatccttctgcagggttggtactgggttgactgat
gatgacttggaaactgttgcaaagaaattgaagccttattttaggaaatatgaatatccg
aagaagatgcaaccaagtttttatcaagttactaatcactcgaaagagagacctgatgtt
tggattgaaagcccagagaaatcaatcattctttctatcaccagtgatatcaggactata
aggtctgaggtatttgctgcgccgtacagcctgagatttccacgtattgatagagttaga
tatgacaagccttggcatgagtgccttggcgtgcaatcatttgtagaactggtgcattca
agtaatggtaccactcaaaaagggacagaacaggaaaaccagcctgatagtaaaacaaaa
cacaaggcacatgctagaaaggcagacaaaaagaatgtctccattgttccttctcatttt
attcggactgacacgtccagcgtaaagggagaaaccttaatattttcaaatcttatgttt
tactttgttaatgtgcctccgacatattctcttgattcatttcacaaaatggttgtggag
catgggggaaggttctcgatgaatttgaacaattcagttactcattgtgttgcagctgaa
agcaaagggatcaagtatcaggcagcaaagctgcatggggacattatccattactcttgg
gccttggattgttgctcacaaaaaaagctcattcctttgcagccaaagtacttccttttt
ctttctgaatcatcaaagatgaaattacagcaagaagttgatcaatactttgacccttac
tattgggaccttgaccttgtggatgtcaaacggctcttaaacaatatccaaagatctgaa
aactccaagacaattgactattacagagcgaagtactgtccaaatgataaatggtccctg
tttcatggctgctctgtttacttctactcttcagctgagtctctgaaagctgattggcaa
gtcttgctgaatctagcactgaggaggttaaagcatgaaattttaatgggtggtggcaaa
ataagtgagaatctcagcaatgctacccatttggtagtcctctcagtaccgggattggat
gtggactttgactcttttattaagagttgttcttttgaagagaaaaatcttgtgtggaaa
aaggggcttcatgttgtcagatctcagtggttggaaaattgcttagagcagggacagaag
ttgcgagaagaccaatatagcttgaaacccaatgattttgaagaaacaaacttcgtagaa
agcaaattggaccaaaatctggaaaaatccaagccagatttcaacggtgttcagaacaag
ggtacatgtacttcacctgaaagtaaaacaaaacagagaggaggcaaagatcaccccgaa
aaatcaatttcatcggttacacctagtcacgggaacaggaagagaagacctgctagcaag
aacacaaagaaaggaaaaacagttgtaacccgagctcaaagagtaccaagacgtcgtgga
aagatgtctgttaagattaacgaagatgggtctgaggaaagtggttctgatgacaaaaca
aatgaggagataaagaagggtgaagggtataatactgaatgctacagaatggccggtagg
gaaaatttcgagtttcatcaaaatcaagcagcagaagaaaatgctagcataaactggcct
aaaaaagctcacgataccgtgatgtgtgaaacaaataatgaccaacctggcaacaaagcc
gagaagttcgaccatatggaactagatgaagggaattacggccatgagatttcaaactca
gaaaagctagaagttatggtcgatccggttcgcgccatgttactagacatgatcccaagc
cttggaataaagcatgtcaaaaccacaaattctgttgtccaaaacgagaaacctcacatg
gataacgatgcagacattcgtgtcgtagaggacgagaaactagatgccgattttattcca
cagcctcaaaagaaaaagaaagtgagttacaaggatgttgccggtgaactactcaaggat
tag

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