KEGG   Gardnerella vaginalis ATCC 14019: HMPREF0421_20204
Entry
HMPREF0421_20204  CDS       T01344                                 
Name
(GenBank) alpha amylase, catalytic domain protein
  KO
K01182  oligo-1,6-glucosidase [EC:3.2.1.10]
Organism
gvg  Gardnerella vaginalis ATCC 14019
Pathway
gvg00052  Galactose metabolism
gvg00500  Starch and sucrose metabolism
gvg01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gvg00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    HMPREF0421_20204
   00500 Starch and sucrose metabolism
    HMPREF0421_20204
Enzymes [BR:gvg01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.10  oligo-1,6-glucosidase
     HMPREF0421_20204
SSDB
Motif
Pfam: Alpha-amylase hDGE_amylase DUF3459 Yme1-like_N
Other DBs
NCBI-ProteinID: ADP38290
UniProt: E3D855
LinkDB
Position
232279..234222
AA seq 647 aa
MTTFDRSNLPESVRTNGATPNPWWANAVVYQIYPRSFQDTNGDGIGDLKGITSRLDYLAD
LGVDVLWLSPVYKSPQDDNGYDISDYQDIDPLFGTLEDMDELLAEAHKRGLKIVMDLVVN
HTSDEHAWFQASRDASSDYADWYWWRPARKGCVPGEPGAEPNKWGSYFGGSAWTYDPKRG
EYYFHQYSPKQPDLNWENPAVRAAVYKMMNWWMDRGIDGFRMDVITQISKRVDSEGRLPG
EYGSQIEDAPAGDDGYSSPYFFCSDGPRLDEFLREMREAVFKGREGFLTVGEAPGISAHR
NTYITNPANGELDMLFLFDQVNVDCANGTKWNPIPLKLTALKRAMADQQQAVSEAGWASL
FFNNHDQPRALSRWGSEASDEMRVLSAKAIAMLLHMHRGTPYVYQGEEIGMTNAHFTSLE
QYRDLEALNMFKQRVEEAHIQSAESMMDALAKRGRDNSRTPMQWNASQYAGFMPFNVPSQ
NNAQPWISVNPNYVDINAAEQMEDSDSVYSFYKRLIELRHSQPVVSAGSWNLVDADDECV
YAFVRQVEQTCENAKADEAGLENGVRSSSAVAGDSSSVSIKKLLVMVNMTDSSVAIPAQS
AELLRNIASNGVSYDDVMISTYSADHALKSLKNGTLAPWEGIAVSLQ
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgactacttttgacagatcgaatttgccagaatccgtgcgcacaaacggtgctacgcca
aacccttggtgggcgaatgcagttgtgtatcagatttatccgcgaagcttccaagatact
aacggcgacggaatcggtgatttgaagggcattacttcgcgtcttgattatttggctgat
ttaggtgttgacgtgctttggcttagtcctgtttacaagtctccgcaagacgataacggc
tacgatatttccgattatcaagatattgatccgctttttggcactctagaagatatggac
gagcttctggcagaagcgcacaagcgcgggcttaagattgtgatggatttagtagtaaat
cacacttccgacgagcacgcttggttccaggcttcaagagatgcttctagcgactacgcg
gattggtattggtggagaccagcgcgcaaaggttgcgttcctggggagccaggtgctgag
ccaaataagtggggctcgtattttggcggttctgcgtggacttacgatccaaagcgcggc
gaatattacttccaccagtattcgccaaagcagccagatttgaattgggaaaatcctgcg
gttcgtgctgccgtgtacaagatgatgaattggtggatggatcgcggaattgacggcttc
cgtatggatgtgattacgcaaatttctaagcgcgtagatagcgaaggacgtttgccaggg
gaatacggttcgcagattgaagatgcgccagcaggcgacgacggctactcttcgccgtat
ttcttctgctccgatggccctcgtttagacgagtttttgcgcgagatgcgcgaggcggtt
ttcaagggtcgtgaaggtttcttaactgttggcgaggctcctggaatttccgcgcatcga
aacacttatattacaaatcctgctaatggtgagctagacatgctcttcttgttcgatcaa
gttaatgttgattgcgcaaatggcactaagtggaatcctattcctcttaagttgacggca
ttaaagcgcgcaatggcagatcagcagcaggcagttagcgaggctggttgggcgagcctg
ttctttaataatcacgatcaaccgcgtgcgctttctcgctggggtagtgaggctagcgat
gagatgcgcgtgctttccgctaaggcgattgcaatgctcttgcacatgcaccgcggcact
ccgtatgtgtatcagggtgaagaaattggcatgacaaacgcgcactttacgagtctcgag
cagtatcgcgatttggaagcgttaaatatgtttaagcagcgcgtagaagaagcgcatatt
cagtcggctgagtcgatgatggatgcgctcgcaaagcgcggtcgcgataattctcgaacg
cctatgcaatggaatgcgtctcaatatgcgggattcatgccttttaatgttccgtcgcaa
aataatgcacagccgtggattagcgtgaatcctaattatgtagatattaatgcggcggag
caaatggaagattcggattccgtttactcgttctacaagcgtttgattgagttgcgccat
tcgcagcctgttgtttcggctggttcttggaatttggttgatgcggatgacgagtgcgtt
tacgcgtttgttaggcaggttgagcagacttgtgagaatgctaaggcagatgaggcaggt
cttgagaatggtgtgcgttcttcaagcgcggttgctggcgattcttcctctgtctcgata
aagaagctgctcgtaatggtaaatatgacggattcgtctgtggcaatacctgctcaaagt
gccgaattgttgcgtaatatcgcctctaatggcgtatcgtatgatgatgtgatgatttct
acctacagcgcggatcatgctcttaaatcacttaaaaatggcacgcttgcgccttgggag
ggaatcgctgttagcttgcaataa

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