Gardnerella vaginalis ATCC 14019: HMPREF0421_20204
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Entry
HMPREF0421_20204 CDS
T01344
Name
(GenBank) alpha amylase, catalytic domain protein
KO
K01182
oligo-1,6-glucosidase [EC:
3.2.1.10
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg00052
Galactose metabolism
gvg00500
Starch and sucrose metabolism
gvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
HMPREF0421_20204
00500 Starch and sucrose metabolism
HMPREF0421_20204
Enzymes [BR:
gvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.10 oligo-1,6-glucosidase
HMPREF0421_20204
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Gene cluster
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Motif
Pfam:
Alpha-amylase
hDGE_amylase
DUF3459
Yme1-like_N
Motif
Other DBs
NCBI-ProteinID:
ADP38290
UniProt:
E3D855
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Position
232279..234222
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AA seq
647 aa
AA seq
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MTTFDRSNLPESVRTNGATPNPWWANAVVYQIYPRSFQDTNGDGIGDLKGITSRLDYLAD
LGVDVLWLSPVYKSPQDDNGYDISDYQDIDPLFGTLEDMDELLAEAHKRGLKIVMDLVVN
HTSDEHAWFQASRDASSDYADWYWWRPARKGCVPGEPGAEPNKWGSYFGGSAWTYDPKRG
EYYFHQYSPKQPDLNWENPAVRAAVYKMMNWWMDRGIDGFRMDVITQISKRVDSEGRLPG
EYGSQIEDAPAGDDGYSSPYFFCSDGPRLDEFLREMREAVFKGREGFLTVGEAPGISAHR
NTYITNPANGELDMLFLFDQVNVDCANGTKWNPIPLKLTALKRAMADQQQAVSEAGWASL
FFNNHDQPRALSRWGSEASDEMRVLSAKAIAMLLHMHRGTPYVYQGEEIGMTNAHFTSLE
QYRDLEALNMFKQRVEEAHIQSAESMMDALAKRGRDNSRTPMQWNASQYAGFMPFNVPSQ
NNAQPWISVNPNYVDINAAEQMEDSDSVYSFYKRLIELRHSQPVVSAGSWNLVDADDECV
YAFVRQVEQTCENAKADEAGLENGVRSSSAVAGDSSSVSIKKLLVMVNMTDSSVAIPAQS
AELLRNIASNGVSYDDVMISTYSADHALKSLKNGTLAPWEGIAVSLQ
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgactacttttgacagatcgaatttgccagaatccgtgcgcacaaacggtgctacgcca
aacccttggtgggcgaatgcagttgtgtatcagatttatccgcgaagcttccaagatact
aacggcgacggaatcggtgatttgaagggcattacttcgcgtcttgattatttggctgat
ttaggtgttgacgtgctttggcttagtcctgtttacaagtctccgcaagacgataacggc
tacgatatttccgattatcaagatattgatccgctttttggcactctagaagatatggac
gagcttctggcagaagcgcacaagcgcgggcttaagattgtgatggatttagtagtaaat
cacacttccgacgagcacgcttggttccaggcttcaagagatgcttctagcgactacgcg
gattggtattggtggagaccagcgcgcaaaggttgcgttcctggggagccaggtgctgag
ccaaataagtggggctcgtattttggcggttctgcgtggacttacgatccaaagcgcggc
gaatattacttccaccagtattcgccaaagcagccagatttgaattgggaaaatcctgcg
gttcgtgctgccgtgtacaagatgatgaattggtggatggatcgcggaattgacggcttc
cgtatggatgtgattacgcaaatttctaagcgcgtagatagcgaaggacgtttgccaggg
gaatacggttcgcagattgaagatgcgccagcaggcgacgacggctactcttcgccgtat
ttcttctgctccgatggccctcgtttagacgagtttttgcgcgagatgcgcgaggcggtt
ttcaagggtcgtgaaggtttcttaactgttggcgaggctcctggaatttccgcgcatcga
aacacttatattacaaatcctgctaatggtgagctagacatgctcttcttgttcgatcaa
gttaatgttgattgcgcaaatggcactaagtggaatcctattcctcttaagttgacggca
ttaaagcgcgcaatggcagatcagcagcaggcagttagcgaggctggttgggcgagcctg
ttctttaataatcacgatcaaccgcgtgcgctttctcgctggggtagtgaggctagcgat
gagatgcgcgtgctttccgctaaggcgattgcaatgctcttgcacatgcaccgcggcact
ccgtatgtgtatcagggtgaagaaattggcatgacaaacgcgcactttacgagtctcgag
cagtatcgcgatttggaagcgttaaatatgtttaagcagcgcgtagaagaagcgcatatt
cagtcggctgagtcgatgatggatgcgctcgcaaagcgcggtcgcgataattctcgaacg
cctatgcaatggaatgcgtctcaatatgcgggattcatgccttttaatgttccgtcgcaa
aataatgcacagccgtggattagcgtgaatcctaattatgtagatattaatgcggcggag
caaatggaagattcggattccgtttactcgttctacaagcgtttgattgagttgcgccat
tcgcagcctgttgtttcggctggttcttggaatttggttgatgcggatgacgagtgcgtt
tacgcgtttgttaggcaggttgagcagacttgtgagaatgctaaggcagatgaggcaggt
cttgagaatggtgtgcgttcttcaagcgcggttgctggcgattcttcctctgtctcgata
aagaagctgctcgtaatggtaaatatgacggattcgtctgtggcaatacctgctcaaagt
gccgaattgttgcgtaatatcgcctctaatggcgtatcgtatgatgatgtgatgatttct
acctacagcgcggatcatgctcttaaatcacttaaaaatggcacgcttgcgccttgggag
ggaatcgctgttagcttgcaataa
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