Gardnerella vaginalis HMP9231: HMPREF9231_0277
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Entry
HMPREF9231_0277 CDS
T01939
Name
(GenBank) ROK family protein
Organism
gvh
Gardnerella vaginalis HMP9231
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GFIT
Motif
Pfam:
ROK
HTH_IclR
HTH_24
HTH_28
HTH_Crp_2
HTH_36
MarR
MarR_2
HTH_26
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AEF31205
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Position
complement(306513..307718)
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AA seq
401 aa
AA seq
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MTLIANTLTSSNKHYSRAELARITGLNRSTLTRLVDSLIEYGIISELHSEITGSGRPAVP
LTPSLHTYASIGLSLSKSNLEACVIDISGNILSRYYEQINDTNPTIILKKIKNIIYSTKQ
KLQKANLPTVSISIAISGLMNTTEQHKISSPNLKWNHVDLSDFYNKNDKDNNLEFIPISF
IDLAAAGAYAEIYLRNKKGNTIPNFLYIHSGNSIDTALIKNNTFEQGCNNWGGKFGHVFV
SSGKSNCSCGHTGCLESFAGSRALIREGKLGENASINNFYAALFRNEPAATRAANIAAEK
LGIAISSFINIFDMPVFIFDGIYSEIFDSVKDKIIETIKERAICSNWSSIEIMKSIVPGN
ASALGAAWKGMNEFLNTPELWIKKSKEALSYYPIQSMSSDI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
ttgacgttaatagctaacacactgacttcaagcaacaaacattattctagagcagaatta
gcaagaataactggattaaataggtcaactcttacacgtttggtagattcactaatagaa
tatggaataattagcgaattacattcagaaataactggatcaggaagaccagcagtacca
ctgaccccatcattacatacttatgcatcaataggattatctttatcaaaatcaaatttg
gaagcctgtgtaatagacatatctggaaatattctttcaagatattatgaacaaataaat
gacacaaatcctacaataatattgaaaaaaatcaaaaacattatttactcaacgaagcaa
aaattgcaaaaagcaaatcttccaacagtatcaatatctatagcaattagcggtttaatg
aatacaactgaacaacacaaaatatcaagcccaaatcttaaatggaaccacgttgattta
tctgacttctacaataagaacgacaaagataataacttagaattcataccaatatcattt
atagaccttgctgcagctggagcatatgcagaaatctatttaagaaacaaaaaaggtaat
acaataccgaattttctctatatacatagcggcaatagcatagacacagcattaataaaa
aataacacttttgaacaagggtgcaataattggggcggaaagttcgggcacgtttttgta
tcatcgggaaaatctaattgttcgtgtgggcatacaggctgtttagaaagctttgctgga
agtcgagccttaataagggaaggaaaactaggagaaaatgcatcgataaataatttttat
gcagcactattcagaaatgagcctgctgcaactcgagccgcaaatatagcagcagaaaag
cttggaatagcaatatcatcatttataaatatatttgacatgccagtttttatatttgat
ggaatatattcagaaattttcgattctgtaaaagataaaataattgagactattaaagaa
agagcaatatgctcaaactggtcatctatagaaataatgaaatctattgttccaggtaat
gcatcagcattaggggcagcatggaaaggtatgaacgaattcttaaatactccagaatta
tggattaaaaagtctaaggaagctttgtcatactaccctatacaatccatgtcttcagat
atataa
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