Geobacillus sp. WCH70: GWCH70_1161
Help
Entry
GWCH70_1161 CDS
T00915
Name
(GenBank) 3' exoribonuclease
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gwc
Geobacillus sp. WCH70
Pathway
gwc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gwc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GWCH70_1161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gwc03019
]
GWCH70_1161
03016 Transfer RNA biogenesis [BR:
gwc03016
]
GWCH70_1161
Enzymes [BR:
gwc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GWCH70_1161
Messenger RNA biogenesis [BR:
gwc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GWCH70_1161
Transfer RNA biogenesis [BR:
gwc03016
]
Prokaryotic type
tRNA degradation factors
GWCH70_1161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KorB
SPATA25
ATP-grasp
S1_2
Motif
Other DBs
NCBI-ProteinID:
ACS24021
UniProt:
C5D9D5
LinkDB
All DBs
Position
1208967..1211105
Genome browser
AA seq
712 aa
AA seq
DB search
MEQEKRIFSIDWAGRPLVVEIGQLAKQANGAVLVRYGDTVVLNTATASKEAKNVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFAEGFRNEVQIVSMVMSV
DQDCSPEMAALFGASLALTISDIPFEGPIAGVTVGRVDGEFVINPTVEQSEKSDIHLVVA
GTKDAINMVEAGADEVPEEVILEAIMFGHEEVKRLIAFQEEIAAQVGKEKMEVVLYELDP
QLEAEIRQLAEEDIKRAVQVPEKLARDAAIEEVKASVIAKYEEQEADEETLKQVNEILHK
LVKEEVRRLITEEKIRPDGRKIDEIRPLSSEVGVLPRTHGSGLFTRGQTQVLSVCTLGAL
GDVQILDGLGIEETKRFMHHYNFPPFSVGETGPMRGPGRREIGHGALGERALEPVVPSEK
EFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKNDDNYTILT
DIQGIEDHLGDMDFKVAGTAKGVTALQMDIKIKGLSREILEEALQQAKKGRMEILEHMMQ
TIREPRKELSKYAPKILTMQINPEKIREVIGPSGKQINKIIDETGVKIDIEQDGTIFISS
VNEAMNQKAKQIIEDIVREVEVGQIYLGKVKRIEKFGAFVELFNGKDGLVHISELAEERV
GRVEDVVSIGDEILVKVMEIDKQGRVNLSRKAVLRDKKEKKGKRPERHRMKP
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagaaaaacgcattttttccatagactgggctggacggccgcttgtcgtggaa
attggccaattagcgaaacaagcgaatggagcggtattagtccgttatggcgacacagtg
gtattaaacacagcaacggcatcaaaagaagcaaaaaacgtcgacttttttccactaacg
gtcaactatgaggagcgtctttatgcggttggtaaaattccgggaggatttattaagcgg
gaaggacgtcctagtgaaaaagcgattttagcaagccgtttaattgaccggccaattcgt
ccattgtttgcggaaggattccgcaatgaagtgcaaatcgtttcgatggtcatgagtgta
gaccaagattgttctccggaaatggcggcgttattcggtgcgtcacttgccttaacgatt
tcggatattccgtttgagggaccgattgccggtgttacagtcggccgtgtggatggagag
tttgtgattaatccgactgtcgaacaatcggaaaaaagcgatattcatcttgttgttgcc
ggcacgaaagacgcgattaatatggtcgaagctggagcggacgaagtgccggaagaagtg
attttagaagcgattatgttcggacatgaagaagtaaaacggctgatcgctttccaagag
gaaatcgccgcccaagtaggcaaagaaaaaatggaagtagttctttatgagcttgatcct
caactagaagcagaaattcgccaactggcggaagaggatattaaacgagctgttcaagtg
ccagaaaaattggcgcgtgatgcagcaattgaggaagtaaaagctagtgtcatcgcaaaa
tacgaagaacaagaagcagatgaagaaacattaaaacaagtaaatgaaattttgcataaa
cttgttaaagaagaagtgcggcggcttattaccgaagaaaaaatacgtccggacggccgt
aagattgacgaaattcggcctctctcctctgaagtcggcgtattgccgcgcacgcacggt
tcagggctgtttacgcgcggacagacgcaagtgcttagtgtttgtacgttaggagcgctt
ggcgatgtacaaatattggacgggcttggtattgaagaaacgaaacggtttatgcaccac
tataacttcccgccattttcggttggcgaaacaggaccgatgcgcggtccaggccgccgt
gaaattggacacggagcgcttggagaacgagcgttagaaccggtcgttccatctgaaaaa
gaatttccatataccattcgccttgtttccgaagtgctagaatcgaacggttcgacatct
caagctagcatttgtgcaagcacgctcgcgatgatggatgcaggtgtcccgattaaagca
ccggtagcgggaatcgcgatgggacttgtgaaaaacgatgacaattatacgattttgaca
gatattcaaggcattgaagaccatctcggagatatggattttaaagtagcgggtacggca
aaaggcgtcaccgctttgcagatggatattaaaattaaaggcttatctcgtgaaatatta
gaagaagcgctccagcaagcgaaaaaaggtcgtatggaaattttagaacatatgatgcaa
acgatccgcgagccgcgcaaagagttgtcgaaatacgctccgaaaattttaacgatgcaa
attaatccagaaaaaattcgcgaagtcatcggcccaagcggaaaacaaattaataaaatt
attgatgaaaccggcgtaaaaattgatatcgaacaagatggaacaattttcatctcgtct
gtcaacgaagcgatgaaccaaaaggcgaagcagattatcgaagatatcgttcgcgaagtc
gaagtcgggcaaatttatttgggtaaagtgaagcgcattgagaaatttggggcatttgtt
gaattgttcaacggcaaagacggtctcgttcatatttccgaattagcagaagagcgtgtc
ggaagagtggaagatgtcgtttcgatcggcgatgaaattttagtaaaagtaatggaaatt
gataaacaaggacgcgttaatttatcgcgaaaagcagtattgcgcgataaaaaggaaaaa
aaaggcaaacgtccggaacggcatagaatgaagccttag
DBGET
integrated database retrieval system
