Paenibacillus sp. Y412MC10: GYMC10_2109
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Entry
GYMC10_2109 CDS
T01100
Name
(GenBank) deoxyxylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym00730
Thiamine metabolism
gym00900
Terpenoid backbone biosynthesis
gym01100
Metabolic pathways
gym01110
Biosynthesis of secondary metabolites
Module
gym_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
GYMC10_2109
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
GYMC10_2109
Enzymes [BR:
gym01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
GYMC10_2109
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
TPP_enzyme_C
E1_dh
PFOR_II
DUF4874
Motif
Other DBs
NCBI-ProteinID:
ACX64390
UniProt:
D3E6M6
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All DBs
Position
2454857..2456764
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AA seq
635 aa
AA seq
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MLLPNIKQPEQLKNLSVDELEDLAGQIRHFLIEKLSVTGGHLAPNLGVVELTLALHYCFD
SPRDKMIFDVGHQAYVHKILTGRMDKFDTLRKYKGLCGFVKRSESEHDVWEAGHSSTSLS
AAMGMAMARDLKGEDNRVIAMIGDGALTGGMAFEALNHIGHEQKKLMVILNDNEMSIAPN
VGAMHNYLSKIRSDRFYLRAKDEVEMVLKKIPAIGGKLAKTAEKMKDSLKYMMVPGVLFE
ELGFTYLGPVDGHDLNKLIDTLKQADNVDGPVLIHAVTTKGKGYRPAESDSHKWHGITPY
KIESGQVLKAVGNPMYTEVFGQTLVELGEQDKRIVAVTPAMPGGSGLIPFSKKFPDRMID
VGIAEQHAATLCAALAMEGMKPVFAVYSTFMQRAYDQIVHDICRHNANVMFAIDRAGFVG
ADGETHQGVYDVAFMRHIPNIVIMMPKDENELRHMMKTALDYNEGPIAYRYPRNNVRGVP
MDTELVPIPIGTWEVVRPGEGYAILASGPMVQLAEEAAEQLKREGIAVEVVNARFLKPLD
GDMLANLAKTGTSMLVLEETSQAGSLGSAVLEYFAEQGIHDAVVSLMGIEDRFIEHGSIP
QQREEVGLTLEGVCQEIRSLKNARTAVLGKRSFMS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcttccaaatatcaaacaaccagaacaacttaaaaatctatcggtggacgaactc
gaggatttagcgggacaaatccgtcattttctaatcgaaaagctgtccgttaccggtggc
catcttgcaccgaatctgggagtggttgaactcacgctggccttgcactattgctttgac
agccctcgtgacaagatgattttcgatgtgggccatcaagcctatgtacacaagatcttg
accggacggatggataaattcgatacgctccgcaaatacaaaggcttgtgcggcttcgtc
aagcggtccgagagcgagcatgatgtctgggaagccggtcacagcagcacctcgctgtct
gccgcaatgggcatggccatggcccgggatctgaaaggcgaagacaatcgggttatcgcc
atgatcggagacggagcccttacaggcggcatggcgtttgaagcgctaaaccatatcggc
cacgagcagaagaagctcatggtcatcctgaatgacaatgaaatgtcgatcgcaccgaat
gtcggtgctatgcataactacttaagcaagatccgttcggaccgtttttatcttcgtgcc
aaagacgaagtggagatggtcttgaagaaaatccctgccatcggcggcaaactcgcgaag
acggcagagaagatgaaggacagccttaaatatatgatggttccgggtgttttattcgag
gaacttggttttacgtatctcgggcctgtggacggacatgatctgaacaaactgatcgat
acattgaagcaggcggacaatgtggatggtcccgtgctgatccatgccgtaacaaccaag
ggcaagggatatcgtccagccgaatcggattcgcataaatggcacggaatcaccccttat
aagattgaatccggccaagtgcttaaggcagtaggcaatccgatgtacacggaagtgttc
ggacagactttggtcgagctgggggaacaggataaacgcatcgtcgccgttacgccggcg
atgccgggcggctcgggcctgatcccgttcagcaagaaatttccggaccgcatgatcgat
gtcgggattgccgagcagcacgcggcaacgctgtgcgcggctctggccatggaaggcatg
aaacccgtgttcgcggtctattccacgttcatgcagcgtgcgtacgaccaaatcgtgcat
gatatttgccgccataacgccaacgtgatgtttgcgattgaccgtgccggctttgtgggt
gcagacggcgaaacgcatcaaggggtatacgatgtggccttcatgcgtcatatcccgaat
atcgtcatcatgatgccaaaagacgagaatgagcttcgacacatgatgaagacggcgctt
gattataatgaaggaccgattgcttaccgttaccctcggaacaatgtgcgcggcgttccg
atggacactgagctggtgcccattccaatcggaacctgggaagtcgtccgtcccggagaa
gggtatgccatcctggcttctggtccgatggttcagctggccgaagaagcagcggagcag
ctcaaacgggaaggcattgcggtagaagtcgtgaatgcccgtttccttaaaccgcttgac
ggagatatgctggcgaatttggcgaagacgggaacgtcgatgctggtcctggaggaaacc
tcgcaagcaggcagtttggggagcgcggttctggaatattttgcagagcagggaatacat
gatgcggtcgtatccttgatggggatcgaagaccggttcatcgagcatggaagcattccg
cagcagcgggaggaagtaggtctcacgctggaaggggtttgccaggaaatccggagcctg
aagaatgcccggaccgccgtactcggcaaaagaagttttatgtcttag
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