Halothece sp. PCC 7418: PCC7418_0915
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Entry
PCC7418_0915 CDS
T02379
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hao
Halothece sp. PCC 7418
Pathway
hao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCC7418_0915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hao03019
]
PCC7418_0915
03016 Transfer RNA biogenesis [BR:
hao03016
]
PCC7418_0915
Enzymes [BR:
hao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PCC7418_0915
Messenger RNA biogenesis [BR:
hao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PCC7418_0915
Transfer RNA biogenesis [BR:
hao03016
]
Prokaryotic type
tRNA degradation factors
PCC7418_0915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
DUF6225
Motif
Other DBs
NCBI-ProteinID:
AFZ43126
UniProt:
K9Y856
LinkDB
All DBs
Position
complement(990508..992667)
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AA seq
719 aa
AA seq
DB search
MMEFQQSISFDGRDIRLTVGRFAPQAGGSVLIECGDTSVLVTATRSSGREGVDFLPLIVD
YEERLYAAGRIPGGFLRREGRPPEKVTLTSRLIDRPLRPLFPQWIRDDIQVVATTLSMDE
LVPPDVLAVTGASIAVICAQIPFYGPMAAVRVGLVGDDFIINPTYDEINNGDLDLVVAGT
PEGVVMVEAGANQLPEQDVIEAIEFGYEAVRDLIEAQQQLMKDQGITIATEEPPKVDPKL
EDFIKSKATEPIKKVLQRFDLDKKGRDDLLDEIKENEIESAIAQLPEDDPLQVMVAEDPK
AISKVFKEVTRSLMRGQIIEDGVRVDGRKLDEVRPVSCDVSILPPRVHGSGLFRRGLTQV
LSLATLGTPGDAQDLADELHPNEEKRYLHHYNFPPYSVGETKPLRSPGRREIGHGALAER
AITPVLPSKEDFPYVLRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPISKPVSGAAMGLI
KEGDQVRVLTDIQGIEDFLGDMDFKVAGTDSGITALQMDMKITGLSLDVVRQAVEQALPA
RIHILEKMMATIDKPKAELSPFAPHLINYKIDPDLIGLVIGPGGKTIKNITEQTGAKVDI
EDSGAMTISASDRDSAIAALNQIKGLTRKISEGDVCLGRVTRIIPIGAFVELMPGKEGMI
HISQLAEYRVGKVEDEVAVGDEVVVKVREIDNKGRLNLTRLNIHPDEAAAARAAVESEE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatggaatttcaacagtcaatatcctttgatggtcgggatattcggcttacagttgga
cggtttgccccacaagcaggaggatcagtcctgattgaatgtggtgatacatctgtatta
gtcacagcgacacgcagtagcggacgagaaggggttgatttcttaccgcttattgtcgat
tacgaagaaagactctacgctgcgggtcgcattccaggagggtttttacgacgagaaggt
cgtccacccgaaaaagtgacgttaaccagccgtttgattgaccgcccgttacgtccatta
ttcccccaatggattcgagatgatattcaggtagtggcgacaaccttatcaatggatgag
ttagttccccctgatgtcttagcggtaacaggagcttcgatcgcggtgatatgcgcccag
atccccttttatggccccatggctgcggttcgggttggcttagtcggagatgactttatt
attaaccccacttacgatgagattaataatggcgatttagatcttgtcgttgcaggaaca
cctgaaggcgtggtcatggtagaagcaggggcgaatcaactccctgaacaggatgtcatt
gaagcgattgagtttggttatgaagcggttcgggatttaattgaggcccaacagcagtta
atgaaagaccaagggattaccatcgccacagaagaacccccaaaagtcgatccgaaattg
gaagattttattaaatcgaaagccacggaaccgattaaaaaggtgttgcaacgatttgat
ctcgataaaaaaggacgagatgatctgctagatgagattaaggaaaatgaaattgaaagc
gcgatcgcgcagttaccagaagatgaccccttacaagtcatggtggctgaagatcccaaa
gcgattagtaaggtctttaaggaagtcacccgcagcttaatgcgaggtcaaatcattgaa
gatggcgtgcgcgtcgatggacgaaaactggatgaagtgcgcccagtcagttgcgatgtc
agtattctcccgccacgagttcatggtagtggtttattccgtcgcggtttaacccaagtg
ctttccttggcgacgttaggaacaccaggcgatgctcaagatttagcggatgaactacac
cccaacgaagaaaaacgctatctccaccattacaattttccgccctattccgtcggagaa
actaagcctctgcggtctccaggacgacgggaaatcggtcacggggcgttagcagaacgg
gcgattacaccagttctcccctcaaaagaagattttccctatgtcttacgggtagtctct
gaggtattatcctcgaatggttcaacttctatggggtcggtttgtggttcaaccctcgct
ttgatggatgctggcgttcccattagtaagcctgttagtggggctgcaatgggcttaatc
aaagaaggagatcaagtccgagtcttaacggatatccaagggattgaagatttcttgggg
gatatggactttaaggttgcgggaaccgatagcgggattaccgccttgcaaatggatatg
aaaatcaccggtttaagtctggatgttgtccgccaagccgttgaacaagcccttccagcg
cgaatccatatcttagagaaaatgatggcgactattgataagcccaaagctgagttatcg
ccatttgcaccccatctgattaattacaaaattgatccagacctcattggtttagtcatt
ggacctggggggaaaaccatcaagaatattaccgaacaaacgggggcgaaagtcgatatt
gaagacagtggtgcgatgaccatttctgcttcggatcgcgacagcgcgatcgcggcgttg
aatcaaatcaaaggactcacccgtaaaatcagtgaaggcgatgtctgtcttggtcgtgtc
acccgcattatccccattggtgcatttgtggaattaatgcctgggaaagaggggatgatt
catatttctcaactcgcagaatatcgtgtcggtaaagtggaagacgaagttgctgtcggc
gatgaagtggttgtcaaagtccgagagattgacaacaaaggacgtttaaatctcacccgc
ttaaacatccatcctgatgaagctgctgctgcgcgggctgctgtagaaagtgaagaataa
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