Glaesserella parasuis SH0165: HAPS_1429
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Entry
HAPS_1429 CDS
T00825
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hap
Glaesserella parasuis SH0165
Pathway
hap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HAPS_1429 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hap03021
]
HAPS_1429 (rpoA)
03400 DNA repair and recombination proteins [BR:
hap03400
]
HAPS_1429 (rpoA)
Enzymes [BR:
hap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HAPS_1429 (rpoA)
Transcription machinery [BR:
hap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HAPS_1429 (rpoA)
DNA repair and recombination proteins [BR:
hap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HAPS_1429 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
ACL32998
UniProt:
B8F6P6
LinkDB
All DBs
Position
complement(1409078..1410067)
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPHLVNIEQISSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDIILTLTKSGIGPVTAADITHDGD
VEIVNPDHVICNLTDKNASISMRIRVQRGRGYVPASARVHTQDDDRPIGRLLVDARFSPV
DRIAYNVEAARVEQRTDLDKLVIEMETNGTLDPEEAIRRAATILAEQLAAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttttaaagccacacttagtgaatattgaacaaattagt
tcaactcacgcaaaagtgaccttagagccgttagaacgtggtttcggccacactttaggt
aacgcacttcgtcgcattttactttcatctatgcctggttgtgcagttacagaagtagaa
attgatggtgtattacacgaatacagcagcaaagaaggcgtacaagaagatattcttgag
gtattgttaaaccttaaaggtctagcggtaaaagtgcaaaataaagatgatattattttg
acactcactaaatctgggattggccctgtaactgcagcagacattactcacgatggtgat
gttgaaattgtgaatccagatcacgttatttgtaacttaacggataaaaatgcatcaatt
agtatgcgtatccgtgtacaacgtggtcgtggttatgtaccagcatctgctcgtgtacat
acacaagacgacgatcgtccaatcggtcgcttattagtcgatgcacgttttagcccggta
gatcgcattgcttacaatgttgaagctgctcgtgttgaacaacgcacagacttagataag
ctcgttatcgagatggaaactaacggaacattagatccagaagaagccatccgccgtgct
gcaacgattttagcagagcaactcgctgcattcgttgatttgcgtgatgttcgtcagcca
gaagtgaaagaagagaaaccggaatttgatccaattcttcttcgtccagtagatgactta
gagctgacagttcgttctgctaactgtttgaaagcagagacaattcactatatcggtgat
ttagtacaacgtacagaagttgagttattaaaaacacctaatcttggtaagaaatcactt
actgaaattaaagatgttctcgcttctcgtggcttatcactcggtatgcgccttgagaat
tggcctccagcaagtattgctgaagactaa
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