Herminiimonas arsenicoxydans: HEAR0258
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Entry
HEAR0258 CDS
T00490
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
har
Herminiimonas arsenicoxydans
Pathway
har03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
har00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HEAR0258 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
har03400
]
HEAR0258 (ruvB)
Enzymes [BR:
har01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEAR0258 (ruvB)
DNA repair and recombination proteins [BR:
har03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HEAR0258 (ruvB)
RecFOR pathway proteins
HEAR0258 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_22
AAA_16
AAA_3
Rad17
AAA_14
AAA_18
nSTAND3
AAA_17
RNA_helicase
NTPase_1
DUF815
TsaE
AAA_28
bpMoxR
AAA_33
ABC_tran
AAA_25
NB-ARC
NACHT
AAA_24
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
CAL60486
UniProt:
A4G1U9
LinkDB
All DBs
Position
250500..251558
Genome browser
AA seq
352 aa
AA seq
DB search
MSIQTDDFSEQRVIAATPASANEEAIERALRPKQLDEYVGQEKIRGQLEIFITAARQRRE
ALDHTLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDVLFID
EIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVRLDLQPFTLVGATTRAGMLTNPLRD
RFGIVARLEFYTPLELTRIVTRSSSLLNAPIDEDGAFEIAKRSRGTPRIANRLLRRVRDY
AEVKGNGDITKAMADAALVMLDVDPVGFDVMDRKLLEAVLFKFNGGPVGLDNLAAAIGEE
RDTIEDVLEPYLIQQGFLQRTPRGRIATPVAYAHFGVTAPQTGPNGELWGGQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagtattcaaaccgacgatttcagcgaacaacgcgtcattgccgctacgcccgcttcc
gccaacgaagaggcgatcgagcgcgcactgcgccccaaacaactcgatgaatatgtaggc
caggaaaaaatccgcggccagctggagatattcattaccgccgcgcggcaacggcgcgaa
gcgctggaccacaccttgctgttcggcccgccgggtttgggcaagaccacgctggcgcac
atcattgcgcgcgaaatgggtgtcaatctgcgccagacttccggcccggtgctggaacgc
gccggcgatctggccgcgctgctgaccaatcttgaggccaatgacgtcttgttcatcgac
gagatacataggctgtcgccggtggtcgaagaaattttgtatccggcgctggaggactat
cagatcgacatcatgataggcgaaggtccggcggcgcgttcggtgcggctcgacctgcaa
ccgttcacattggtcggcgccacgacgcgtgccggcatgctgaccaaccctttgcgcgat
cgcttcggcatcgtggcgcggcttgagttttatacgccgctggaattgaccaggatagtc
acacgcagctcgtcattgttgaatgcacctatcgatgaagatggtgcattcgagattgcc
aaacgcagtcgcggcacgccgcgtattgccaatcgcctgctgcgccgcgtgcgcgactat
gcggaagtcaaaggcaatggcgacattaccaaggctatggccgatgccgcgctggtgatg
ctggatgtcgatccggttggtttcgatgtaatggatcgcaagctgctggaagcggtgctg
ttcaaattcaacggcggtccggtcggtctcgacaatctggctgccgcaattggcgaagag
cgcgataccatcgaagacgtactggagccatacctgattcaacaaggcttcctgcaacgt
acaccgcgcggccgcatcgcaacgccggtagcctacgcgcatttcggcgtcacggcgccg
caaaccggccctaacggtgagttgtggggcgggcaataa
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