Herpetosiphon aurantiacus: Haur_4336
Help
Entry
Haur_4336 CDS
T00614
Name
(GenBank) alpha amylase catalytic region
Organism
hau
Herpetosiphon aurantiacus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
Malt_amylase_C
A_amylase_dom_C
Alpha-amylase_N
Cyc-maltodext_C
Alpha-amylase_C
Motif
Other DBs
NCBI-ProteinID:
ABX06968
UniProt:
A9AY86
LinkDB
All DBs
Position
5542255..5544999
Genome browser
AA seq
914 aa
AA seq
DB search
MRNKRFGGLLALVLLALALLPNPKSVAAGDNNVHWDELYHAAPSANPRTELVPGESFSFQ
QAEVNGTIVSTTNVQISILALAGDLTSAQIRYWNGTEQIVAMSKVKTLTASFRNTASTSY
DLWRGTIPAHAAGSTVYYRVRVYDGSVLALLKAQNGSYTNPRGQHVRGANYDPDDYSFTV
QSGGMPTATPTIAPTATRTATPSATATRTPTPVGTISATPTPSRTPTATATNTSTPTVSA
TPSGACSGAAVGNNTIISSAVYHDSTNSVYRDPLGSLQAGQSASIRLRTCSNDVSAVSLS
VWLTGAPFSQPSFSYPLTVVSNDGTYAMWQASVPAPSSSTDQWYQFKLTDGSTIGYYVVA
NTSNTGPGVWSATALDRSWKLGTVPAPPQDYAVPTWLQDAVIYQIFPDRFRDGDSSNNFN
NVRVYGPNTCNGYSGAGAPNCLASIHSNWNETPTTPGYGIDFYGGDLQGIVDKINAGYFN
DLGVNVLYLNPIFDASSNHGYDTNDYYGINPRFGNLAKFDEMIAAADAKGLKVILDGVFN
HAGMDSIYLQGYPGYKTDRWTGINGACESDSSPYRSWFTQGSAGTSGSYPCVGGWGWKGW
YGYETIPEFIENDPVKQFFYRDGSAQSPNGKSVTRFWLERGIAGWRFDVAQDITHAWWSD
MRPYVKNGYGDSESLLLGEVTGGCDWGLYRAYLNQNELDSVMNYCFRDWAVSFANGNAPS
SFDSSYNAFRAQMPASPWFGMMNLVSSHDSTRALRLLNDDKARMKLMVLLQMTLPGAPSV
YYGDEVGVTGGGDPDNRRTYPWADKGGSPDTVMYAHFKKLIALRRTYPALSSGDVATLLV
NDASKLYGYRRWKGTQEAVVVLNNGTANQTATVNVSHLANGTVLTDVLNGGSYTVSNGQL
TLPVAAQSGVVLVK
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacaaacgatttggcggattgctcgcgttggtactgttggccttggccttgttg
ccaaacccgaagtcggttgccgctggcgataataatgtgcactgggatgagctgtatcat
gctgctcccagcgccaaccctcgcactgagcttgtgccaggcgaaagtttcagctttcaa
caagccgaagtcaatggcacaattgtttcaaccaccaatgtccaaatttcaatcttagcg
ctggctggcgacctaaccagcgcccaaattcgctactggaacggaaccgagcagatcgta
gcgatgagcaaagtcaaaacgctgactgccagtttccgcaacaccgctagcaccagctac
gatctgtggcgtggcacaattccagcgcatgctgctggctcaaccgtgtattatcgggtt
cgggtgtatgatggcagcgttttagccttactcaaagcccaaaatggcagctacaccaat
ccacgcggccagcatgtacgtggcgcaaactatgatcccgatgattatagttttacggtg
caaagcggcggtatgcccacagctactccaacaattgccccaaccgccacccgcaccgcc
actcccagcgctacagccacgcgcacgccaaccccggttggcactatcagcgctacgccc
acgccatcgcgcaccccaactgcgactgccaccaacacctcaactcccacagtttcagca
acaccatcgggggcttgcagcggcgcagcggttggcaacaatacaattatcagcagtgcg
gtgtaccacgatagcaccaacagcgtgtatcgcgacccgcttggttcgctgcaagcaggc
caatcggccagcattcgtttgcgcacttgtagtaatgatgttagcgctgtgagtttatcg
gtttggttaactggcgcaccattcagccaaccatcgttcagctatccattaactgtggta
agcaatgatggaacctacgccatgtggcaagccagcgtaccagcccccagcagctcaacc
gatcagtggtatcaatttaagctgaccgatggctcgacaattggctattatgtggttgcc
aacaccagcaacacaggtccaggcgtgtggagcgccaccgcgcttgatcgttcgtggaag
ctgggtacagttcccgcgccaccgcaagattatgccgtaccaacatggctgcaagatgca
gtgatctatcaaattttccctgatcgcttccgtgatggcgatagcagcaacaatttcaat
aatgtgcgggtctacggcccaaacacctgcaacggctacagcggtgcaggtgcacccaac
tgtttggcctcgatccacagcaattggaatgaaacgccaaccaccccaggctatggcatc
gatttttatggtggcgatttgcaaggcattgtcgataaaatcaatgctggttattttaac
gaccttggcgttaatgtgctgtatctcaacccgatttttgatgcttcatcgaaccatggc
tacgataccaacgattattatggtatcaacccacgctttggcaatttggcaaaattcgac
gagatgattgccgccgccgatgccaaaggcctcaaagtgattcttgatggtgtgttcaac
cacgctggcatggatagcatttatcttcaaggttatccaggctataaaaccgaccgctgg
acaggcatcaacggcgcttgtgaatcggattcatcgccctaccgcagttggttcacccaa
ggctcagctggcaccagcggctcgtacccatgtgttggcggttggggctggaagggttgg
tatggctatgaaaccatccctgaatttatcgaaaacgacccagtgaagcaatttttctat
cgcgatggcagcgctcaaagccccaatggcaaatcagtaacccgcttctggctcgaacgg
ggtatcgctggctggcgcttcgatgtagcccaagatatcacccacgcttggtggagcgat
atgcggccttatgttaaaaatggttatggcgatagcgaaagtttattgctgggcgaagtt
acgggcggctgtgattggggcttatatcgtgcctatctcaaccaaaacgagcttgattcg
gtgatgaactattgtttccgtgattgggcagtgagcttcgccaatggcaatgcacctagc
tcattcgacagtagctacaatgccttccgtgcgcaaatgcctgctagcccatggtttggc
atgatgaacttagtcagttcgcacgactcaactcgcgccttgcgcttgctcaacgacgac
aaagcccgcatgaaattgatggtgttgttgcaaatgaccctaccaggtgcgccatcggtg
tattatggcgacgaagttggggtaactggtggcggcgatcccgacaaccgccgcacctat
ccttgggccgataaaggtggtagccccgatacggtgatgtatgctcatttcaagaaattg
atcgcgctacgccgtacctatccagcgctcagcagtggtgatgttgcaaccttgttggtc
aacgatgccagcaaactttatggctatcgccgctggaaaggcacgcaagaggcagttgta
gtgctcaataacggcacggccaaccaaactgcgacagttaatgtgagccatttagccaat
ggcacagtcttgaccgatgtcttgaatggtggcagctacaccgttagcaacggccaattg
accttgccagtcgcagcccaatcgggcgtggtgctggtgaagtaa
DBGET
integrated database retrieval system