Halothiobacillus sp. LS2: A9404_10680
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Entry
A9404_10680 CDS
T04441
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
haz
Halothiobacillus sp. LS2
Pathway
haz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
haz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A9404_10680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haz03021
]
A9404_10680
03400 DNA repair and recombination proteins [BR:
haz03400
]
A9404_10680
Enzymes [BR:
haz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A9404_10680
Transcription machinery [BR:
haz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A9404_10680
DNA repair and recombination proteins [BR:
haz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A9404_10680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
ANJ67780
UniProt:
A0A191ZIS5
LinkDB
All DBs
Position
2400945..2401940
Genome browser
AA seq
331 aa
AA seq
DB search
MQLGSTELLKPRLVDVQVLDETRARVVLEPLERGFGYTLGNALRRILLSSIPGVAVTEAE
IEGVVHEYTTIEGVHEDVLEILLNLKGLSVVLHGRDEAVLSIKKTGPGTITAADIKTDHA
VEIINPDHHIATLNVQGALAMTFKVQRGKGYVPASARREESGGQIGRLLVDASFSPLRRV
AYSVERARVEQRTDLDSLVLDIETNGSISAEDAIRHAAGILVDQLSVFVDLKAEKSEPVQ
EQAPTVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEIELLKTPNLGKKSLTEI
KDVLAKQGLSLGQRLESWPPAELQNLAETKI
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgggttctaccgaactgctcaagccgcgattggttgatgtccaggttctggac
gaaacgcgtgcgcgcgtcgtgctggagccgcttgagcgcggttttggctatacgctgggt
aatgcgctccgtcgtatcctgctgtcttccatcccgggcgttgcggtgaccgaggcagaa
atcgaaggcgtagttcacgaatacaccacgatcgaaggtgtacacgaagacgtcctcgag
atcctgttgaatctcaaggggctgtccgtcgttctgcacggccgtgatgaggcggttctg
agcatcaagaagacgggtcccggtacgattaccgcagcggatatcaagactgaccatgcc
gtcgagatcatcaatcccgatcatcacattgcgaccctgaacgtacagggggcactcgcg
atgacattcaaggtgcagcgtggcaaaggctatgtccctgccagcgcgcgtcgtgaagag
tcgggtggtcaaattggccgtctgctagtggatgcatccttctctcctctgcgtcgtgtc
gcttattcggttgagcgcgcgcgtgtggagcagcgtaccgatctggattccctggtgctc
gatatcgaaaccaatggttccatttctgccgaggatgccattcgtcatgctgcaggcatt
ctggttgaccagttgtctgtcttcgtggacctgaaagcggagaaatccgagccggttcaa
gagcaggcgccgaccgtcgatccgattctgttgcggccggtcgatgacttggagctgacg
gttcgttccgccaactgcctgaaggccgaaaacatttattacatcggtgacctgattcag
cgcaccgaaattgaactgctcaaaaccccgaacctgggcaagaaatccctgaccgaaatc
aaggatgtcctggcgaagcaggggttgtcactgggacagcgactcgaaagctggccgccg
gctgagttacaaaatctggctgagaccaagatctaa
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