Hyphomonadaceae bacterium UKL13-1: AEM38_15385
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Entry
AEM38_15385 CDS
T04338
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbc03016
]
AEM38_15385
Enzymes [BR:
hbc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AEM38_15385
Transfer RNA biogenesis [BR:
hbc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AEM38_15385
Prokaryotic type
AEM38_15385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AMS30506
UniProt:
A0A7U4QVJ1
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All DBs
Position
3318013..3318975
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AA seq
320 aa
AA seq
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MSRRKKGQDIHGWIVLDKDLHLTSTDAVTRVRRAFDAKKAGHAGTLDPLATGILPIALGE
ATKTVAWLMEAEKSYRFTVEWGASTDTQDREGKIIATSDVRPCKEAIEAALVGFIGEIQQ
VPPIYSAIKVAGERSYDLARDGEVPELKARTVLLIEARLVDVPDADHATIECRCGKGFYV
RALARDLATALGAEGHVSALRRTSVGPFHESAAITLEKLQEVCNSDAASDSLLPVETALD
DIPALAVTAEEAFRLRQGRGIVLLPHQVEELRSKRRPRVVSGEDMSRAALATLQGQAVAI
GDARAGRFEPVRVFQLSARD
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcgcaagaagggccaagacatccacggctggatcgttctggacaaagacctg
catctaacttccaccgatgccgtcacccgcgtccggcgtgcgtttgacgccaagaaggct
ggccatgctggcacgttggatccgttagcaaccggaattctaccgatcgcgcttggcgaa
gccaccaaaaccgtcgcttggttgatggaggctgagaaatcttatcgcttcacggtcgaa
tggggggcctctaccgatacccaagaccgcgaaggcaaaattattgccacctcggacgtg
cggccttgcaaagaggcaatcgaggcggctctggttggctttatcggtgagatccaacaa
gtcccgcccatctatagcgccattaaagtggcgggcgagcgatcctatgatctcgcgcgc
gacggcgaagtgcccgagttgaaggcccggacagtgttgctgattgaagcgcgtctggtc
gatgtgcccgacgccgatcatgccaccatcgaatgccgctgtggcaagggcttttacgtc
cgcgccttggctcgtgaccttgcaacagcgcttggcgcggagggtcatgtgagcgctttg
cggcgaacttcagtcggcccattccatgagagcgcagcaataacactggaaaagctacag
gaagtatgcaatagcgacgccgcgtccgacagccttttgccagttgagaccgcgctggac
gacatcccggcgctggccgtaacagcggaagaggctttcaggttgcggcaaggccgcggg
attgttcttctcccccaccaggttgaagagctgcgctccaagcgcagaccccgtgttgta
tccggcgaagacatgagccgagcagcactggcaacccttcaaggccaagccgtcgctata
ggagacgcacgcgcgggacggtttgagccggtccgtgtgtttcaactcagtgcgcgcgat
tga
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