Halogeometricum borinquense: Hbor_05910
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Entry
Hbor_05910 CDS
T01359
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hbo
Halogeometricum borinquense
Pathway
hbo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hbor_05910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hbo02000
]
Hbor_05910
Transporters [BR:
hbo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Hbor_05910
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ADQ66192
UniProt:
E4NMN7
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Position
complement(552103..553755)
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AA seq
550 aa
AA seq
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MSDKNNTTHSKLNRRRVLQGLGGAGIAGLAGCAGGSDTGTDSGNTDGGNEESNNKLKMAL
VKSPIEFDPIIANDVPSSQVIDRIVEGLYTYDESTGIVPALAKGEPEVSKEGKRYVVKLN
SDATYSNGDKVTAEDVKYSYTAPVTEETENASELNMIDTITVVDEETVQFDLKYAYAPFM
TTLTWYVVPKSVREEDKNAFKSGDSLIGSGPFVFDSWQEGQYARIKANENYWGEPKPKVP
EIEFVPVTEATTRVTTLKNSENDVIEEIPPKQYPTVRSISDASIQEVPGIGYFYAAFNCK
EGPTADPKVREAIDYAFDMDQAVSSYVEPTGIRQYSPYPKSISEDWGFPLDEWKSIPHSK
DIDKTKSLFDEAGVSDDYSFQVIVPPDDKREQIGISISNGIKEAGWDASVQRLDWGAFLD
KYVSGSEDDYNIYTLGWSGSPDPDAFSYFLFGRDEDTLGVTNGTYYGNNSESGKEVSEKF
IKARQMLDRDKRKQLYTEATTTLLEDRAHLPAYNLKNSFGVKDYVKDFHAHPVDSFTVAT
DYNNLSVGTK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaaaacaatacaactcacagtaaactgaaccgtcgccgtgtcctccaaggc
ctcggtggtgccggtatcgcaggcctcgccgggtgtgctggcggctccgacaccggaacc
gacagtggaaacacagacggtgggaacgaagagtcgaacaacaagctcaagatggccctc
gtcaagagccccatcgagttcgaccccatcatcgcaaacgacgttccgtcgtcgcaggtc
atcgaccgtatcgtcgaaggcctctacacgtacgacgagagtacgggtatcgtcccggcc
ctcgccaagggcgaacccgaagtgtccaaggaaggcaaacggtacgtcgtcaaactgaac
agcgatgcgacgtactccaacggtgacaaagtcacggccgaggacgtgaaatactcgtac
acggccccggtcaccgaagagaccgagaacgcctccgaactgaacatgatcgacaccatc
acggttgtcgatgaagagacggttcagttcgacctgaagtacgcgtacgcgccgttcatg
accacgctcacgtggtacgtcgttccgaagtccgtccgcgaggaggacaagaatgcgttc
aaaagcggcgacagcctgatcggctccggcccgttcgtcttcgatagctggcaggaaggc
cagtacgctcgcatcaaggccaacgagaactattggggcgaaccgaagccgaaagttccg
gaaatcgaattcgtgccggtcactgaggcgacgacgcgcgtcacgacccttaagaacagc
gagaacgacgttatcgaggagattccgccgaagcagtacccgacggtccgcagcatctcc
gacgcaagcattcaggaagtgcccggtatcgggtacttctacgcggcgttcaactgtaag
gaaggcccgacggctgacccgaaggtccgcgaggcaatcgactacgcgttcgatatggat
caggcggtctcctcctacgtcgaaccgacggggattcgtcagtacagcccctacccgaaa
tcgatctccgaggactggggcttcccgctcgacgagtggaaaagtatcccccactcgaag
gacatcgacaagacgaagtccctgtttgacgaggccggcgtgtcggacgactactcgttc
caggtcatcgtcccgccggacgacaaacgtgaacagatcggtatctccatctccaacggt
atcaaggaggccggttgggacgcaagcgttcagcgtctcgactggggtgcgttcctcgac
aagtacgtctccggcagcgaggacgactacaacatctacacgctcggttggtccggctcg
cccgaccccgacgcgttctcgtacttcctgttcggccgtgacgaagacacgctcggcgtg
acgaacgggacgtactacgggaacaacagcgagtccggcaaagaggtcagcgagaagttc
atcaaagcgcgtcagatgctcgaccgtgacaagcgtaaacagctctacacggaagcgacg
acgacgcttctcgaagaccgtgcgcacctgcccgcgtacaacctcaagaacagcttcggc
gtgaaagactacgtcaaagacttccacgcccacccggtggacagcttcacggtggcgacc
gactacaacaacctctctgtcggtacgaaataa
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