Halogeometricum borinquense: Hbor_28230
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Entry
Hbor_28230 CDS
T01359
Name
(GenBank) DNA-directed RNA polymerase, subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hbo
Halogeometricum borinquense
Pathway
hbo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hbo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hbor_28230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbo03021
]
Hbor_28230
Enzymes [BR:
hbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hbor_28230
Transcription machinery [BR:
hbo03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Hbor_28230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
ADQ68366
UniProt:
E4NLB7
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All DBs
Position
complement(2694222..2696054)
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AA seq
610 aa
AA seq
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MAQTQQREAKVYVNGSLVGTHPDPKQLAEQIREARRRGDVSQMVNVSVKERTREVIINAD
AGRARRPLIVVEDGEPLLSDDEIAAVKNDEIDFEDLIDRGYIEFIDAEEEEDIYVAVDED
DLNEDHTHLEIDPQLIFGIGAGMIPYPEHNASPRITMGAGMMKQSLGLPSANYRIRPDTR
QHLLHYPQLSMVKTQTTEQIGFDERPAAQNFTVAVMSYEGFNIEDALVMNKGSVDRAMAR
SHFFRTYEGEERRYPGGQEDRFEVPSQDVRGARGEDAYNHLDDDGLVNPETVVDENSVLL
GKTSPPRFLEEPDDMGGLSPQKRRETSVTMRSGENGVVDTVTLMEGEDGSKLAKVSVRDQ
RIPELGDKFASRHGQKGVVGHLAPQEDMPFTADGVVPDLVINPHALPSRMTVGHVLEMLG
GKVGALEGRRVDGTAFQGEDESELRGALEEHGFKSSGKEVMYSGVTGEKIEAEIFVGIIF
YHKLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRLGEMERDTVIGHGAAMVLQERL
LDSSDKEEVYVSADTGMVAVEDRDQRRIYDPVTGDEDNIHEIEISYAFKLLLDEMIALGI
RPRLNLEDAV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggctcagactcagcaacgcgaagcgaaggtatacgttaacggtagtttggtcgggacc
catcctgaccccaaacagctcgccgaacagattcgggaagcgcgtcgccgcggcgacgtg
agtcagatggtgaacgtctccgtcaaggagcgcacccgcgaagttatcatcaacgcagac
gcgggtcgcgcccgccgtcccctcatcgtcgtcgaagacggcgaaccgctcctctcggac
gacgagattgcggccgtcaagaacgacgaaatcgacttcgaggacctcatcgaccgcggt
tacatcgagttcatcgacgccgaggaggaagaggacatctacgtcgccgttgacgaagat
gacctgaacgaggatcacacgcacctcgaaatcgacccgcaactcatcttcggtatcggt
gccgggatgattccgtaccccgaacacaacgcctcgccgcgtattaccatgggtgcgggg
atgatgaagcagtcgctcgggcttccctctgcgaactaccgcatccggcccgacacgcgt
cagcacctcctgcactacccgcagctgtcgatggtgaagacgcagacgacagaacagatc
ggtttcgacgagcgaccggcggcacagaacttcactgtcgccgtgatgtcctacgagggg
ttcaacatcgaggacgcactcgtcatgaacaaggggtcggttgaccgcgcgatggcgcgg
tcgcacttcttccgcacctacgagggtgaggaacgtcgctaccccggtggacaggaagac
cgcttcgaggttccgagtcaggacgtgcgtggtgcgcgcggggaagacgcgtacaaccac
ctcgacgacgacggtctcgtcaatcccgagacagtggtggacgaaaactccgtcctcctc
gggaaaacgtcgccgccgcggttcctcgaagaaccggacgacatgggtggtctctcgccg
cagaagcgccgcgaaacctccgttacgatgcgctcgggcgagaacggtgtcgttgacacc
gtcaccctgatggagggtgaagacggctcgaagctggcgaaggtctcggtgcgtgaccag
cgtattccggaactcggtgacaagttcgcatctcgccacggacagaagggtgtcgtgggc
cacttggctccacaggaggacatgcccttcaccgcagacggcgtggtacccgacttggtc
atcaacccgcacgcgcttccgtcgcgcatgacggtcggccacgtgctggagatgctcggc
ggcaaggtcggcgcactcgaaggacgccgtgttgacggcaccgccttccagggcgaggac
gaatccgaactccgcggcgcgcttgaggaacacggattcaagtcctcggggaaggaggtc
atgtactccggcgtcaccggcgagaagattgaggccgaaatcttcgtcggcatcatcttc
taccacaaactgtaccacatggtgagcaacaaactgcacgcccgttcgcgcgggccggtg
caggtgcttacccgtcagccgacggaaggtcgtgcccgcgagggtggcctccgtctcggg
gagatggagcgtgacaccgtcatcgggcacggtgccgcgatggtcctgcaggagcgactg
ctcgactcctccgacaaggaggaagtgtacgtctccgcggacaccgggatggtggccgtc
gaggaccgcgaccaacgccgcatctacgaccccgtcaccggcgacgaggacaacatccac
gagatagagatcagttacgcgttcaagctcctcttggacgagatgatcgcgctcggcatc
cgaccgcgactgaacctcgaagacgcagtctaa
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