Hyperthermus butylicus: Hbut_1236
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Entry
Hbut_1236 CDS
T00468
Name
(GenBank) predicted nonsense mediated mRNA decay
KO
K07562
60S ribosomal export protein NMD3
Organism
hbu
Hyperthermus butylicus
Brite
KEGG Orthology (KO) [BR:
hbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hbu03009
]
Hbut_1236
Ribosome biogenesis [BR:
hbu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
Hbut_1236
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GFIT
Motif
Pfam:
NMD3
DUF6011
C1_1
DZR_2
Motif
Other DBs
NCBI-ProteinID:
ABM81068
UniProt:
A2BM57
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Position
1240794..1241537
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AA seq
247 aa
AA seq
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MGPAVLRGYCARCGKPLTPGDSVGPFCLDCYVEMFKLLCVPERVRFDYCKYCGAYRIGHR
WQSGGELEEAVQRFVEEVAGGVKPCRPEVRGFSVEGVEPLTKPSWRTIYAIRYSIQVQGV
DKPISQTYRVEVRASPTICPTCKDVRGGEYNVLLQVRGIKPAELARLLGPLLDSSEQIQN
SIVDIVEYNNGVDFLLLDRGSAAKIIKEIKKKYIVVTRTTGEDVGITSTGHMRRRTVIAV
RVRRPRL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
ttggggccagcagttttgagaggctattgtgctaggtgtggtaagccgcttacaccggga
gatagtgttggaccattctgcctcgactgttacgtggagatgtttaaactgctctgtgta
cctgaacgagtgagatttgactattgtaaatactgtggggcctaccggattggccaccgc
tggcagagtggcggcgagctggaagaggctgttcaacgttttgtagaagaggttgctgga
ggcgttaagccgtgcaggcctgaggttaggggctttagtgttgagggcgtggagcccctg
acaaagccgtcctggaggacaatatacgctatacgctacagcatacaagtacaaggtgtg
gacaagcctataagccagacgtaccgtgttgaggttagagctagcccgacaatatgtcct
acatgcaaggatgttaggggtggagagtacaacgtactgctccaggtgcgcgggataaag
cctgccgagttagctagactcctcggcccattgctcgactctagcgagcaaatacagaac
tccatagttgacatagtagagtataataatggtgttgacttcctattgcttgataggggt
agtgcagctaaaataattaaggaaatcaagaagaagtacatagtggttacccgtacaact
ggcgaggatgtcggcataacatctactgggcatatgaggaggcgtactgtgatagccgtt
agggtgaggaggccacggttatga
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