KEGG   Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_1817
Entry
HCBAA847_1817     CDS       T02494                                 
Symbol
clpB
Name
(GenBank) ATP-dependent CLP protease
  KO
K03694  ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
hcb  Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:hcb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:hcb03110]
    HCBAA847_1817 (clpB)
Chaperones and folding catalysts [BR:hcb03110]
 Heat shock proteins
  HSP100
   HCBAA847_1817 (clpB)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small Clp_N AAA_22 AAA_16 Sigma54_activat AAA_18 nSTAND3 RuvB_N AAA_14 AAA_7 bpMoxR AAA_6 RNA_helicase TsaE TniB NACHT AAA_3 RsgA_GTPase IstB_IS21 TIP49 AAA_24 AAA_28 AAA_17 Rad17 AAA_25 SKI
Other DBs
NCBI-ProteinID: BAM33037
UniProt: I7HDU3
LinkDB
Position
1714086..1716338
AA seq 750 aa
MIGQNLTLIFNESIDIAKEMHHNILTTEHLFLATLNNTQGISILQKCGGNIQEMRQMTNL
YLKKYIPYSQEVSKSPKQTPALDRIIESMVSHAQSSNRQSIDVGDLLASIMEENQSFSTQ
ILKSQGIDRLSVLEVITQQEQDSQTNEQESHEQSYLKQYTKNLTLLAKEGKIDPVIGREQ
EIWRVSEILARRKKNNPILVGEPGVGKTAIAEGLALEIYHKKLPKALHNAQIFALDVGAM
ISGSKYRGDFEKRLKGVLEEMALIKNAVLFIDEIHTIVGAGATSGSSLDASNLLKPSLAN
GTLRCIGATTFAEFKTHFDKDKALSRRFSKVEVKEPSLQDCYAIIEGLAPIYEKYHQVTY
TKNALKACVDLSARYVSDKFLPDKAIDLLDEVGANTKIYHTNKPKIEVKDIESILSKSVH
IPKSTISSDESKMMKSLANNLKKKIFSQDSAIMELARVIKANKAGLSESNKPIGSFVFAG
PSGVGKTELSKELAKLLGIAFIKFDMSEYMEPHSISRLIGAPAGYVGFEQGGLLVDAVRK
SPYCVLLLDEIEKAHSDIYNILLQILDSASLTDNLGNRADFKNVIVIMTSNAGSKDSNTL
GFNASLQHKNDTAIKLLLSPELRSRIDSIIYFNPLGLKEYLLIAKKYIDELATSLKSRHI
ELKIDSKALHFLASQSVDTALGAREIKKIIDSEIKNKLSDEILFGSLKKGGECLISLATK
PQAHIELIYKETQKKLKIKPSTNFTKEKAK
NT seq 2253 nt   +upstreamnt  +downstreamnt
atgataggacaaaatctcacgcttatttttaatgaatctattgatattgctaaagaaatg
caccataatatccttacaaccgagcatttattccttgccacactcaacaacactcaaggc
atatcaatcctacaaaaatgcggcggcaatatccaagaaatgcgacaaatgacaaatcta
tatctcaaaaaatatatcccatactcacaagaagtcagcaaaagtccaaagcaaacccca
gcccttgatagaattatagaatctatggtgagccacgctcaaagtagcaaccgccaaagc
attgatgtaggcgacttacttgcttcaataatggaagaaaatcaaagctttagcacacag
attctcaaatctcaaggtattgatagactaagcgtgctagaagtcatcacgcaacaagaa
caagattcacaaacaaacgagcaggaaagccacgaacaaagctatttaaagcaatataca
aagaatcttacccttctagcaaaagagggtaagattgaccccgttatcggtagagaacag
gagatttggcgtgtgagtgagattctagctaggcgaaaaaagaataatcccattttagtt
ggcgaacccggcgtgggtaaaaccgccattgctgaaggattggcattagagatttatcac
aaaaagcttccaaaagccctgcataacgcacagatttttgcccttgatgtgggggcgatg
atttcagggagtaaatatcgtggcgattttgaaaaacgccttaagggtgtgctagaagaa
atggcacttattaaaaatgctgtgctttttattgatgagattcacaccattgtgggagca
ggggctacttctggctcaagccttgatgcctcaaatctgcttaaaccatcccttgctaat
ggcacactgcgttgcattggtgcaacaacctttgcggagtttaaaacacattttgacaaa
gacaaggctttgtctcgcagattcagcaaagtagaagtcaaagagccaagtttgcaagac
tgctatgcgattattgaaggattagcccccatttatgaaaaatatcatcaagtaacatat
accaaaaatgcactcaaagcctgtgtagatttatctgcacgatatgtgagtgataaattt
ttacccgataaagccatagatttgcttgatgaagttggggcaaatacaaaaatctaccac
accaacaagccaaaaattgaagtaaaagatatagaatctattctcagcaaaagtgtgcat
atccccaaaagcaccataagtagtgatgaaagcaagatgatgaaatcccttgcaaataat
cttaaaaagaaaatcttttctcaagattcagccattatggagcttgcacgcgtgattaag
gcaaataaggcagggttaagcgagagtaataaacccattggtagctttgtctttgctggt
cctagtggcgttggtaaaacagagcttagcaaggaacttgccaagcttttgggcattgct
tttattaaatttgatatgagtgaatatatggagccacattccatttcaaggctcattggc
gcacctgcgggatatgtgggctttgagcaaggggggctgcttgttgatgcggtgcgtaaa
agcccctattgtgtgctattgcttgatgagatagaaaaagcccatagcgatatttataat
attttgttgcagattctagattcagcaagtttgactgataatctcggcaatagggcggat
tttaaaaatgtcattgtgattatgacaagtaacgccgggagtaaagatagtaacacgctt
ggctttaatgcgagcttacagcataaaaatgacactgctataaagctactgctttccccg
gagctaagaagtcgcattgatagtattatttactttaatcctttgggattaaaggagtat
ttgcttattgctaaaaaatacattgatgaacttgccacttctcttaaatctcgtcatatt
gaacttaagatagattctaaagcattgcattttctagcttcacagagtgtggatacagcc
cttggagctagagagataaaaaaaatcattgatagtgagattaaaaataaattgagtgat
gagattttatttggctcacttaaaaaaggtggagaatgccttatctcacttgccaccaaa
ccacaagcacacattgagctaatctacaaagagacgcaaaaaaagctcaaaatcaaacca
agcacaaacttcactaaagaaaaagcaaaatga

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