Helicobacter cinaedi CCUG 18818 = ATCC BAA-847: HCBAA847_1817
Help
Entry
HCBAA847_1817 CDS
T02494
Symbol
clpB
Name
(GenBank) ATP-dependent CLP protease
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
hcb
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
Brite
KEGG Orthology (KO) [BR:
hcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hcb03110
]
HCBAA847_1817 (clpB)
Chaperones and folding catalysts [BR:
hcb03110
]
Heat shock proteins
HSP100
HCBAA847_1817 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
Clp_N
AAA_22
AAA_16
Sigma54_activat
AAA_18
nSTAND3
RuvB_N
AAA_14
AAA_7
bpMoxR
AAA_6
RNA_helicase
TsaE
TniB
NACHT
AAA_3
RsgA_GTPase
IstB_IS21
TIP49
AAA_24
AAA_28
AAA_17
Rad17
AAA_25
SKI
Motif
Other DBs
NCBI-ProteinID:
BAM33037
UniProt:
I7HDU3
LinkDB
All DBs
Position
1714086..1716338
Genome browser
AA seq
750 aa
AA seq
DB search
MIGQNLTLIFNESIDIAKEMHHNILTTEHLFLATLNNTQGISILQKCGGNIQEMRQMTNL
YLKKYIPYSQEVSKSPKQTPALDRIIESMVSHAQSSNRQSIDVGDLLASIMEENQSFSTQ
ILKSQGIDRLSVLEVITQQEQDSQTNEQESHEQSYLKQYTKNLTLLAKEGKIDPVIGREQ
EIWRVSEILARRKKNNPILVGEPGVGKTAIAEGLALEIYHKKLPKALHNAQIFALDVGAM
ISGSKYRGDFEKRLKGVLEEMALIKNAVLFIDEIHTIVGAGATSGSSLDASNLLKPSLAN
GTLRCIGATTFAEFKTHFDKDKALSRRFSKVEVKEPSLQDCYAIIEGLAPIYEKYHQVTY
TKNALKACVDLSARYVSDKFLPDKAIDLLDEVGANTKIYHTNKPKIEVKDIESILSKSVH
IPKSTISSDESKMMKSLANNLKKKIFSQDSAIMELARVIKANKAGLSESNKPIGSFVFAG
PSGVGKTELSKELAKLLGIAFIKFDMSEYMEPHSISRLIGAPAGYVGFEQGGLLVDAVRK
SPYCVLLLDEIEKAHSDIYNILLQILDSASLTDNLGNRADFKNVIVIMTSNAGSKDSNTL
GFNASLQHKNDTAIKLLLSPELRSRIDSIIYFNPLGLKEYLLIAKKYIDELATSLKSRHI
ELKIDSKALHFLASQSVDTALGAREIKKIIDSEIKNKLSDEILFGSLKKGGECLISLATK
PQAHIELIYKETQKKLKIKPSTNFTKEKAK
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgataggacaaaatctcacgcttatttttaatgaatctattgatattgctaaagaaatg
caccataatatccttacaaccgagcatttattccttgccacactcaacaacactcaaggc
atatcaatcctacaaaaatgcggcggcaatatccaagaaatgcgacaaatgacaaatcta
tatctcaaaaaatatatcccatactcacaagaagtcagcaaaagtccaaagcaaacccca
gcccttgatagaattatagaatctatggtgagccacgctcaaagtagcaaccgccaaagc
attgatgtaggcgacttacttgcttcaataatggaagaaaatcaaagctttagcacacag
attctcaaatctcaaggtattgatagactaagcgtgctagaagtcatcacgcaacaagaa
caagattcacaaacaaacgagcaggaaagccacgaacaaagctatttaaagcaatataca
aagaatcttacccttctagcaaaagagggtaagattgaccccgttatcggtagagaacag
gagatttggcgtgtgagtgagattctagctaggcgaaaaaagaataatcccattttagtt
ggcgaacccggcgtgggtaaaaccgccattgctgaaggattggcattagagatttatcac
aaaaagcttccaaaagccctgcataacgcacagatttttgcccttgatgtgggggcgatg
atttcagggagtaaatatcgtggcgattttgaaaaacgccttaagggtgtgctagaagaa
atggcacttattaaaaatgctgtgctttttattgatgagattcacaccattgtgggagca
ggggctacttctggctcaagccttgatgcctcaaatctgcttaaaccatcccttgctaat
ggcacactgcgttgcattggtgcaacaacctttgcggagtttaaaacacattttgacaaa
gacaaggctttgtctcgcagattcagcaaagtagaagtcaaagagccaagtttgcaagac
tgctatgcgattattgaaggattagcccccatttatgaaaaatatcatcaagtaacatat
accaaaaatgcactcaaagcctgtgtagatttatctgcacgatatgtgagtgataaattt
ttacccgataaagccatagatttgcttgatgaagttggggcaaatacaaaaatctaccac
accaacaagccaaaaattgaagtaaaagatatagaatctattctcagcaaaagtgtgcat
atccccaaaagcaccataagtagtgatgaaagcaagatgatgaaatcccttgcaaataat
cttaaaaagaaaatcttttctcaagattcagccattatggagcttgcacgcgtgattaag
gcaaataaggcagggttaagcgagagtaataaacccattggtagctttgtctttgctggt
cctagtggcgttggtaaaacagagcttagcaaggaacttgccaagcttttgggcattgct
tttattaaatttgatatgagtgaatatatggagccacattccatttcaaggctcattggc
gcacctgcgggatatgtgggctttgagcaaggggggctgcttgttgatgcggtgcgtaaa
agcccctattgtgtgctattgcttgatgagatagaaaaagcccatagcgatatttataat
attttgttgcagattctagattcagcaagtttgactgataatctcggcaatagggcggat
tttaaaaatgtcattgtgattatgacaagtaacgccgggagtaaagatagtaacacgctt
ggctttaatgcgagcttacagcataaaaatgacactgctataaagctactgctttccccg
gagctaagaagtcgcattgatagtattatttactttaatcctttgggattaaaggagtat
ttgcttattgctaaaaaatacattgatgaacttgccacttctcttaaatctcgtcatatt
gaacttaagatagattctaaagcattgcattttctagcttcacagagtgtggatacagcc
cttggagctagagagataaaaaaaatcattgatagtgagattaaaaataaattgagtgat
gagattttatttggctcacttaaaaaaggtggagaatgccttatctcacttgccaccaaa
ccacaagcacacattgagctaatctacaaagagacgcaaaaaaagctcaaaatcaaacca
agcacaaacttcactaaagaaaaagcaaaatga
DBGET
integrated database retrieval system