Halomonas chromatireducens: LOKO_01530
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Entry
LOKO_01530 CDS
T04292
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
hco
Halomonas chromatireducens
Pathway
hco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOKO_01530 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hco03400
]
LOKO_01530 (alkA)
Enzymes [BR:
hco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LOKO_01530 (alkA)
DNA repair and recombination proteins [BR:
hco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LOKO_01530 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
AMD00598
UniProt:
A0A0X8HDE4
LinkDB
All DBs
Position
1606803..1607747
Genome browser
AA seq
314 aa
AA seq
DB search
MNLSTETGRPGEASRLPELTLNLPYRPPYDWQAILAFLARRTIPGLERIDGECYHRVFRV
GEAVGSVSVKHVPADNALLASIRLPEAAALSGVTARLQRLFDLEADPEAICRGLGRDVTL
APLVASRPGLRVPGGWDPFEVAVRAILGQQVSVDAATRLAGRLVERLGERLADQTETGLD
RLFPVPERFTFDEIKALGMPGARANALVGVASAYRERPQLFERRDLDDTVAHLCALPGIG
AWTAHYIAMRGLQESDAFLPSDVALQRVLAEQGRRPTPRELLARAEAWRPWRAYAVMHLW
HADAATTQANPQRE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctcgaccgaaaccgggcgccccggtgaagcttcccgcctgcccgagctgacg
ctgaacttgccgtatcggccaccctatgactggcaggcgatactggccttcctggcgcgc
cggaccattccggggctcgagcgcatcgatggggagtgctatcaccgggtcttccgggtg
ggcgaggcggtcggtagcgtaagtgtgaagcatgttcccgctgacaacgccttgctcgct
tcgatccgactgcccgaggccgcggccctgtctggcgtcacggcccggctgcagcggctg
ttcgacctggaggccgatcctgaggcgatatgccggggacttggccgcgatgtcacgctg
gcgccgctagtggcgagccgcccaggactgcgcgtgccgggtggttgggaccctttcgag
gtcgccgtgcgggcaatccttggccagcaggtcagcgttgatgccgccacccggctggcc
ggacgcctggtcgaacgtctgggtgaacgtttggcggatcagacggaaaccggcctggac
cgactgttcccagtgcccgaacgcttcaccttcgatgagatcaaggcgctaggcatgccc
ggcgcgcgagccaatgccctggtgggggtggcgtcggcctatcgtgagcggccgcagctg
ttcgagcggcgagatctcgacgacaccgtggcccacctgtgcgccttgcccggcattggc
gcatggacagcccactacatcgccatgcgcggactgcaggagagcgatgccttcctgcct
tcggacgtggcgctgcaacgggtgctggcggaacagggccggcggcccacgccgcgtgag
ctgcttgcgcgtgccgaggcctggcggccctggcgcgcctacgccgtgatgcacctgtgg
catgccgatgccgccaccacgcaagcaaatccgcaacgggagtag
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